Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC100827.2-201ENST00000563214 1194 ntBASIC14.12□□□□□ -0.15
VSX2P58304 DUX4L46-201ENST00000566845 751 ntBASIC14.12□□□□□ -0.15
VSX2P58304 MIR4525-201ENST00000580000 75 ntBASIC14.12□□□□□ -0.15
VSX2P58304 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.12□□□□□ -0.15
VSX2P58304 AC008825.2-201ENST00000603374 718 ntBASIC14.12□□□□□ -0.15
VSX2P58304 AL022328.3-201ENST00000607943 679 ntBASIC14.12□□□□□ -0.15
VSX2P58304 AC007663.3-201ENST00000609632 465 ntBASIC14.12□□□□□ -0.15
VSX2P58304 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.12□□□□□ -0.15
VSX2P58304 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.12□□□□□ -0.15
VSX2P58304 AL008638.5-201ENST00000623814 1298 ntBASIC14.12□□□□□ -0.15
VSX2P58304 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.12□□□□□ -0.15
VSX2P58304 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.12□□□□□ -0.15
VSX2P58304 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.12□□□□□ -0.15
VSX2P58304 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
VSX2P58304 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
VSX2P58304 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
VSX2P58304 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.12□□□□□ -0.15
VSX2P58304 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
VSX2P58304 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.12□□□□□ -0.15
VSX2P58304 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
VSX2P58304 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.11□□□□□ -0.15
VSX2P58304 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VSX2P58304 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.11□□□□□ -0.15
VSX2P58304 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.11□□□□□ -0.15
VSX2P58304 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.11□□□□□ -0.15
VSX2P58304 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 POM121L10P-201ENST00000436994 1285 ntBASIC14.11□□□□□ -0.15
VSX2P58304 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.11□□□□□ -0.15
VSX2P58304 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.11□□□□□ -0.15
VSX2P58304 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.11□□□□□ -0.15
VSX2P58304 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.11□□□□□ -0.15
VSX2P58304 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.11□□□□□ -0.15
VSX2P58304 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.11□□□□□ -0.15
VSX2P58304 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VSX2P58304 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
VSX2P58304 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.11□□□□□ -0.15
VSX2P58304 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.1□□□□□ -0.15
VSX2P58304 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
VSX2P58304 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
VSX2P58304 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.1□□□□□ -0.15
VSX2P58304 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
VSX2P58304 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.1□□□□□ -0.15
VSX2P58304 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.1□□□□□ -0.15
VSX2P58304 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 CICP12-201ENST00000455801 843 ntBASIC14.1□□□□□ -0.15
VSX2P58304 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.1□□□□□ -0.15
VSX2P58304 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.1□□□□□ -0.15
VSX2P58304 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.1□□□□□ -0.15
VSX2P58304 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VSX2P58304 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
VSX2P58304 AC009955.4-201ENST00000597192 544 ntBASIC14.1□□□□□ -0.15
VSX2P58304 AC027601.3-201ENST00000622907 509 ntBASIC14.1□□□□□ -0.15
VSX2P58304 GPR182-203ENST00000622922 591 ntBASIC14.1□□□□□ -0.15
VSX2P58304 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
VSX2P58304 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms