Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.56□□□□□ -0.24
CLDN20P56880 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN20P56880 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.56□□□□□ -0.24
CLDN20P56880 AC008687.7-202ENST00000637404 953 ntBASIC13.56□□□□□ -0.24
CLDN20P56880 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.56□□□□□ -0.24
CLDN20P56880 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 AHCYP2-201ENST00000430630 1300 ntBASIC13.56□□□□□ -0.24
CLDN20P56880 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 AC113367.3-201ENST00000508316 1912 ntBASIC13.56□□□□□ -0.24
CLDN20P56880 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN20P56880 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN20P56880 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN20P56880 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN20P56880 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 AC023090.2-201ENST00000625182 2110 ntBASIC13.55□□□□□ -0.24
CLDN20P56880 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CLDN20P56880 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN20P56880 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN20P56880 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN20P56880 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLDN20P56880 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN20P56880 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CLDN20P56880 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.55□□□□□ -0.24
CLDN20P56880 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN20P56880 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 AC007274.1-201ENST00000439805 662 ntBASIC13.55□□□□□ -0.24
CLDN20P56880 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.55□□□□□ -0.24
CLDN20P56880 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.55□□□□□ -0.24
CLDN20P56880 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLDN20P56880 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
CLDN20P56880 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 CLUHP2-201ENST00000426660 1303 ntBASIC13.55□□□□□ -0.24
CLDN20P56880 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN20P56880 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN20P56880 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN20P56880 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN20P56880 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN20P56880 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CLDN20P56880 AC126335.2-201ENST00000623362 4637 ntBASIC13.54□□□□□ -0.24
CLDN20P56880 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN20P56880 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CLDN20P56880 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CLDN20P56880 MST1P2-201ENST00000457982 2291 ntBASIC13.54□□□□□ -0.24
CLDN20P56880 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.54□□□□□ -0.24
CLDN20P56880 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.54□□□□□ -0.24
CLDN20P56880 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN20P56880 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.54□□□□□ -0.24
CLDN20P56880 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CLDN20P56880 YBX1P6-201ENST00000442962 1002 ntBASIC13.54□□□□□ -0.24
CLDN20P56880 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLDN20P56880 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.54□□□□□ -0.24
CLDN20P56880 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.54□□□□□ -0.24
CLDN20P56880 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.54□□□□□ -0.24
CLDN20P56880 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.54□□□□□ -0.24
CLDN20P56880 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.54□□□□□ -0.24
CLDN20P56880 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms