Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
PER3P56645 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
PER3P56645 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PER3P56645 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
PER3P56645 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.74□□□□□ -0.21
PER3P56645 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.74□□□□□ -0.21
PER3P56645 AC253536.4-201ENST00000440539 267 ntBASIC13.74□□□□□ -0.21
PER3P56645 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
PER3P56645 AC025181.2-201ENST00000606994 802 ntBASIC13.74□□□□□ -0.21
PER3P56645 AL138709.1-201ENST00000614840 1693 ntBASIC13.74□□□□□ -0.21
PER3P56645 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.74□□□□□ -0.21
PER3P56645 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.74□□□□□ -0.21
PER3P56645 AL356585.2-201ENST00000625078 2396 ntBASIC13.74□□□□□ -0.21
PER3P56645 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
PER3P56645 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.74□□□□□ -0.21
PER3P56645 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.74□□□□□ -0.21
PER3P56645 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PER3P56645 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PER3P56645 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
PER3P56645 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.73□□□□□ -0.21
PER3P56645 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PER3P56645 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PER3P56645 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PER3P56645 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.73□□□□□ -0.21
PER3P56645 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
PER3P56645 Z97180.1-201ENST00000445173 988 ntBASIC13.73□□□□□ -0.21
PER3P56645 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 AC114812.1-204ENST00000449669 728 ntBASIC13.73□□□□□ -0.21
PER3P56645 AL590640.2-201ENST00000457038 527 ntBASIC13.73□□□□□ -0.21
PER3P56645 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.73□□□□□ -0.21
PER3P56645 RN7SL720P-201ENST00000488178 304 ntBASIC13.73□□□□□ -0.21
PER3P56645 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.73□□□□□ -0.21
PER3P56645 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.73□□□□□ -0.21
PER3P56645 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.73□□□□□ -0.21
PER3P56645 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.73□□□□□ -0.21
PER3P56645 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC13.73□□□□□ -0.21
PER3P56645 AC244157.2-201ENST00000616239 1006 ntBASIC13.73□□□□□ -0.21
PER3P56645 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PER3P56645 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
PER3P56645 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.73□□□□□ -0.21
PER3P56645 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.73□□□□□ -0.21
PER3P56645 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
PER3P56645 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
PER3P56645 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
PER3P56645 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.72□□□□□ -0.21
PER3P56645 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PER3P56645 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PER3P56645 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PER3P56645 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
PER3P56645 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.72□□□□□ -0.21
PER3P56645 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.72□□□□□ -0.21
PER3P56645 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.72□□□□□ -0.21
PER3P56645 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PER3P56645 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.72□□□□□ -0.21
PER3P56645 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms