Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC025186.1-201ENST00000478174 870 ntBASIC17.79■□□□□ 0.44
NUP98P52948 AC093826.1-201ENST00000508655 993 ntBASIC17.79■□□□□ 0.44
NUP98P52948 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.79■□□□□ 0.44
NUP98P52948 AC226150.1-201ENST00000544259 466 ntBASIC17.79■□□□□ 0.44
NUP98P52948 VENTXP3-201ENST00000546480 773 ntBASIC17.79■□□□□ 0.44
NUP98P52948 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 AC244250.3-201ENST00000620749 366 ntBASIC17.79■□□□□ 0.44
NUP98P52948 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.79■□□□□ 0.44
NUP98P52948 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NUP98P52948 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 AL139158.3-201ENST00000641212 1562 ntBASIC17.79■□□□□ 0.44
NUP98P52948 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.79■□□□□ 0.44
NUP98P52948 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.79■□□□□ 0.44
NUP98P52948 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.79■□□□□ 0.44
NUP98P52948 ODCP-201ENST00000459650 1639 ntBASIC17.79■□□□□ 0.44
NUP98P52948 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.79■□□□□ 0.44
NUP98P52948 BAK1P1-201ENST00000317045 636 ntBASIC17.79■□□□□ 0.44
NUP98P52948 RNVU1-8-201ENST00000364272 125 ntBASIC17.79■□□□□ 0.44
NUP98P52948 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.79■□□□□ 0.44
NUP98P52948 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC17.79■□□□□ 0.44
NUP98P52948 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.79■□□□□ 0.44
NUP98P52948 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.79■□□□□ 0.44
NUP98P52948 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.79■□□□□ 0.44
NUP98P52948 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.79■□□□□ 0.44
NUP98P52948 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
NUP98P52948 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NUP98P52948 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NUP98P52948 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.78■□□□□ 0.44
NUP98P52948 FUCA1P1-201ENST00000374476 1351 ntBASIC17.78■□□□□ 0.44
NUP98P52948 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NUP98P52948 ACTG1P19-201ENST00000418987 1116 ntBASIC17.78■□□□□ 0.44
NUP98P52948 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC17.78■□□□□ 0.44
NUP98P52948 AQP7P5-201ENST00000428759 1049 ntBASIC17.78■□□□□ 0.44
NUP98P52948 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 AQP7P4-201ENST00000447083 1042 ntBASIC17.78■□□□□ 0.44
NUP98P52948 AQP7P2-201ENST00000453967 1041 ntBASIC17.78■□□□□ 0.44
NUP98P52948 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.78■□□□□ 0.44
NUP98P52948 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.78■□□□□ 0.44
NUP98P52948 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
NUP98P52948 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
NUP98P52948 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.78■□□□□ 0.44
NUP98P52948 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
NUP98P52948 AQP7P3-201ENST00000624547 1041 ntBASIC17.78■□□□□ 0.44
NUP98P52948 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.78■□□□□ 0.44
NUP98P52948 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.78■□□□□ 0.44
NUP98P52948 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NUP98P52948 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 AC068760.1-201ENST00000493579 1953 ntBASIC17.78■□□□□ 0.44
NUP98P52948 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.78■□□□□ 0.44
NUP98P52948 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.78■□□□□ 0.44
NUP98P52948 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC17.78■□□□□ 0.44
NUP98P52948 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.78■□□□□ 0.44
NUP98P52948 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NUP98P52948 AL022313.4-201ENST00000562756 2046 ntBASIC17.78■□□□□ 0.44
NUP98P52948 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.77■□□□□ 0.44
NUP98P52948 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.77■□□□□ 0.44
NUP98P52948 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NUP98P52948 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NUP98P52948 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.77■□□□□ 0.44
NUP98P52948 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NUP98P52948 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP98P52948 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.77■□□□□ 0.44
NUP98P52948 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.77■□□□□ 0.44
NUP98P52948 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.77■□□□□ 0.44
NUP98P52948 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC17.77■□□□□ 0.44
NUP98P52948 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
NUP98P52948 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NUP98P52948 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC17.77■□□□□ 0.44
NUP98P52948 FO393412.1-201ENST00000619841 382 ntBASIC17.77■□□□□ 0.44
NUP98P52948 AL451007.2-201ENST00000632004 563 ntBASIC17.77■□□□□ 0.44
NUP98P52948 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.77■□□□□ 0.44
NUP98P52948 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP98P52948 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NUP98P52948 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP98P52948 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NUP98P52948 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.77■□□□□ 0.44
NUP98P52948 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NUP98P52948 AC113367.3-201ENST00000508316 1912 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms