Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.36■□□□□ 0.05
CLCN4P51793 RN7SL530P-201ENST00000485097 298 ntBASIC15.36■□□□□ 0.05
CLCN4P51793 MRPL22P1-201ENST00000505398 616 ntBASIC15.36■□□□□ 0.05
CLCN4P51793 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN4P51793 AC084781.1-201ENST00000613737 656 ntBASIC15.36■□□□□ 0.05
CLCN4P51793 AC025262.2-201ENST00000623975 1056 ntBASIC15.36■□□□□ 0.05
CLCN4P51793 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN4P51793 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CLCN4P51793 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 AC091951.1-201ENST00000512854 2465 ntBASIC15.36■□□□□ 0.05
CLCN4P51793 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN4P51793 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.36■□□□□ 0.05
CLCN4P51793 AGAP7P-201ENST00000582299 2062 ntBASIC15.36■□□□□ 0.05
CLCN4P51793 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLCN4P51793 AGAP14-201ENST00000624701 2060 ntBASIC15.36■□□□□ 0.05
CLCN4P51793 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 AC139712.1-201ENST00000378256 1875 ntBASIC15.35■□□□□ 0.05
CLCN4P51793 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN4P51793 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLCN4P51793 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN4P51793 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN4P51793 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN4P51793 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN4P51793 NORAD-201ENST00000565493 5339 ntBASIC15.35■□□□□ 0.05
CLCN4P51793 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN4P51793 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN4P51793 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN4P51793 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLCN4P51793 Z69890.1-201ENST00000382990 339 ntBASIC15.35■□□□□ 0.05
CLCN4P51793 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLCN4P51793 AC018463.1-201ENST00000456674 917 ntBASIC15.35■□□□□ 0.05
CLCN4P51793 ORAOV1P1-201ENST00000503108 395 ntBASIC15.35■□□□□ 0.05
CLCN4P51793 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.35■□□□□ 0.05
CLCN4P51793 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.35■□□□□ 0.05
CLCN4P51793 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN4P51793 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLCN4P51793 AP001184.1-201ENST00000637936 376 ntBASIC15.35■□□□□ 0.05
CLCN4P51793 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
CLCN4P51793 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN4P51793 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN4P51793 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
CLCN4P51793 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN4P51793 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.35■□□□□ 0.05
CLCN4P51793 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
CLCN4P51793 CICP23-201ENST00000605013 2741 ntBASIC15.35■□□□□ 0.05
CLCN4P51793 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN4P51793 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.35■□□□□ 0.05
CLCN4P51793 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLCN4P51793 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
CLCN4P51793 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCN4P51793 MARK2P16-201ENST00000605714 1723 ntBASIC15.34■□□□□ 0.05
CLCN4P51793 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 AC068587.6-202ENST00000641839 5619 ntBASIC15.34■□□□□ 0.05
CLCN4P51793 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 DBET-201ENST00000630918 3363 ntBASIC15.34■□□□□ 0.05
CLCN4P51793 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CLCN4P51793 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CLCN4P51793 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CLCN4P51793 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms