Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.34□□□□□ -0.11
CLCN2P51788 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.34□□□□□ -0.11
CLCN2P51788 AL162274.1-201ENST00000617191 1098 ntBASIC14.34□□□□□ -0.11
CLCN2P51788 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.34□□□□□ -0.11
CLCN2P51788 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CLCN2P51788 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.34□□□□□ -0.11
CLCN2P51788 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLCN2P51788 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCN2P51788 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
CLCN2P51788 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCN2P51788 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CLCN2P51788 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLCN2P51788 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.34□□□□□ -0.11
CLCN2P51788 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLCN2P51788 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLCN2P51788 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLCN2P51788 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CLCN2P51788 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CLCN2P51788 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.33□□□□□ -0.11
CLCN2P51788 INE2-201ENST00000630399 1874 ntBASIC14.33□□□□□ -0.11
CLCN2P51788 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLCN2P51788 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLCN2P51788 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.33□□□□□ -0.11
CLCN2P51788 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLCN2P51788 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLCN2P51788 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLCN2P51788 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLCN2P51788 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.33□□□□□ -0.11
CLCN2P51788 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CLCN2P51788 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLCN2P51788 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.33□□□□□ -0.12
CLCN2P51788 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CLCN2P51788 ACKR1-201ENST00000368121 1240 ntBASIC14.33□□□□□ -0.12
CLCN2P51788 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CLCN2P51788 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CLCN2P51788 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.33□□□□□ -0.12
CLCN2P51788 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CLCN2P51788 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLCN2P51788 TMEM14DP-201ENST00000422205 345 ntBASIC14.33□□□□□ -0.12
CLCN2P51788 KRT43P-201ENST00000434019 910 ntBASIC14.33□□□□□ -0.12
CLCN2P51788 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCN2P51788 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.33□□□□□ -0.12
CLCN2P51788 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLCN2P51788 AC004066.1-201ENST00000502488 802 ntBASIC14.33□□□□□ -0.12
CLCN2P51788 AC068587.3-201ENST00000526613 355 ntBASIC14.33□□□□□ -0.12
CLCN2P51788 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CLCN2P51788 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.33□□□□□ -0.12
CLCN2P51788 BTNL10-201ENST00000595971 695 ntBASIC14.33□□□□□ -0.12
CLCN2P51788 AC233724.13-201ENST00000598383 410 ntBASIC14.33□□□□□ -0.12
CLCN2P51788 BX539320.1-201ENST00000623759 877 ntBASIC14.33□□□□□ -0.12
CLCN2P51788 AC005252.2-201ENST00000624630 1141 ntBASIC14.33□□□□□ -0.12
CLCN2P51788 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLCN2P51788 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLCN2P51788 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.33□□□□□ -0.12
CLCN2P51788 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLCN2P51788 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.33□□□□□ -0.12
CLCN2P51788 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.33□□□□□ -0.12
CLCN2P51788 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLCN2P51788 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLCN2P51788 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.32□□□□□ -0.12
CLCN2P51788 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCN2P51788 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLCN2P51788 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CLCN2P51788 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CLCN2P51788 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCN2P51788 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCN2P51788 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCN2P51788 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCN2P51788 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCN2P51788 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLCN2P51788 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms