Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.54■□□□□ 0.24
USP11P51784 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.54■□□□□ 0.24
USP11P51784 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.54■□□□□ 0.24
USP11P51784 XBP1P1-201ENST00000436573 652 ntBASIC16.54■□□□□ 0.24
USP11P51784 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.54■□□□□ 0.24
USP11P51784 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.54■□□□□ 0.24
USP11P51784 AC009779.1-201ENST00000551138 283 ntBASIC16.54■□□□□ 0.24
USP11P51784 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.54■□□□□ 0.24
USP11P51784 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.54■□□□□ 0.24
USP11P51784 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.54■□□□□ 0.24
USP11P51784 AC104506.1-201ENST00000609247 429 ntBASIC16.54■□□□□ 0.24
USP11P51784 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.54■□□□□ 0.24
USP11P51784 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.54■□□□□ 0.24
USP11P51784 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
USP11P51784 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
USP11P51784 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP11P51784 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.54■□□□□ 0.24
USP11P51784 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.54■□□□□ 0.24
USP11P51784 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
USP11P51784 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.53■□□□□ 0.24
USP11P51784 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.53■□□□□ 0.24
USP11P51784 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.53■□□□□ 0.24
USP11P51784 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.53■□□□□ 0.24
USP11P51784 AHCYP4-201ENST00000419201 1315 ntBASIC16.53■□□□□ 0.24
USP11P51784 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.53■□□□□ 0.24
USP11P51784 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
USP11P51784 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
USP11P51784 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.53■□□□□ 0.24
USP11P51784 BX284668.4-201ENST00000453917 508 ntBASIC16.53■□□□□ 0.24
USP11P51784 AKR7A2P1-201ENST00000460134 915 ntBASIC16.53■□□□□ 0.24
USP11P51784 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.53■□□□□ 0.24
USP11P51784 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.53■□□□□ 0.24
USP11P51784 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.53■□□□□ 0.24
USP11P51784 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.53■□□□□ 0.24
USP11P51784 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.53■□□□□ 0.24
USP11P51784 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
USP11P51784 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.53■□□□□ 0.24
USP11P51784 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.53■□□□□ 0.24
USP11P51784 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.53■□□□□ 0.24
USP11P51784 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 AC138028.6-201ENST00000616106 1482 ntBASIC16.53■□□□□ 0.24
USP11P51784 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
USP11P51784 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
USP11P51784 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
USP11P51784 BX640514.1-201ENST00000583223 1918 ntBASIC16.53■□□□□ 0.24
USP11P51784 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP11P51784 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.53■□□□□ 0.24
USP11P51784 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
USP11P51784 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.52■□□□□ 0.24
USP11P51784 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.52■□□□□ 0.24
USP11P51784 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.52■□□□□ 0.24
USP11P51784 AC011498.7-201ENST00000624986 2027 ntBASIC16.52■□□□□ 0.24
USP11P51784 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
USP11P51784 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
USP11P51784 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
USP11P51784 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
USP11P51784 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms