Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
VEGFBP49765 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
VEGFBP49765 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.37■□□□□ 0.21
VEGFBP49765 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
VEGFBP49765 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
VEGFBP49765 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 KHSRPP1-201ENST00000427983 1768 ntBASIC16.37■□□□□ 0.21
VEGFBP49765 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VEGFBP49765 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 CRIP1P2-201ENST00000425396 228 ntBASIC16.37■□□□□ 0.21
VEGFBP49765 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC16.37■□□□□ 0.21
VEGFBP49765 AC004910.1-201ENST00000433493 787 ntBASIC16.37■□□□□ 0.21
VEGFBP49765 OR2A1-AS1-203ENST00000468575 568 ntBASIC16.37■□□□□ 0.21
VEGFBP49765 RPL29P2-201ENST00000488409 460 ntBASIC16.37■□□□□ 0.21
VEGFBP49765 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC16.37■□□□□ 0.21
VEGFBP49765 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC16.37■□□□□ 0.21
VEGFBP49765 ABCD1P3-201ENST00000562927 605 ntBASIC16.37■□□□□ 0.21
VEGFBP49765 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
VEGFBP49765 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.37■□□□□ 0.21
VEGFBP49765 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.37■□□□□ 0.21
VEGFBP49765 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.37■□□□□ 0.21
VEGFBP49765 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
VEGFBP49765 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.36■□□□□ 0.21
VEGFBP49765 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
VEGFBP49765 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 AC022532.1-201ENST00000624563 1728 ntBASIC16.36■□□□□ 0.21
VEGFBP49765 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
VEGFBP49765 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VEGFBP49765 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VEGFBP49765 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.36■□□□□ 0.21
VEGFBP49765 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC16.36■□□□□ 0.21
VEGFBP49765 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
VEGFBP49765 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC16.36■□□□□ 0.21
VEGFBP49765 AC000077.1-201ENST00000420012 953 ntBASIC16.36■□□□□ 0.21
VEGFBP49765 CA5BP1-205ENST00000435806 1064 ntBASIC16.36■□□□□ 0.21
VEGFBP49765 AC099343.1-201ENST00000513481 609 ntBASIC16.36■□□□□ 0.21
VEGFBP49765 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC16.36■□□□□ 0.21
VEGFBP49765 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
VEGFBP49765 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.36■□□□□ 0.21
VEGFBP49765 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC16.36■□□□□ 0.21
VEGFBP49765 AC138627.1-201ENST00000641127 1257 ntBASIC16.36■□□□□ 0.21
VEGFBP49765 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
VEGFBP49765 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
VEGFBP49765 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.36■□□□□ 0.21
VEGFBP49765 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.35■□□□□ 0.21
VEGFBP49765 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC16.35■□□□□ 0.21
VEGFBP49765 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VEGFBP49765 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
VEGFBP49765 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC16.35■□□□□ 0.21
VEGFBP49765 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VEGFBP49765 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VEGFBP49765 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.35■□□□□ 0.21
VEGFBP49765 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
VEGFBP49765 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.35■□□□□ 0.21
VEGFBP49765 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VEGFBP49765 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VEGFBP49765 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VEGFBP49765 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VEGFBP49765 MIR193A-201ENST00000384882 88 ntBASIC16.35■□□□□ 0.21
VEGFBP49765 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
VEGFBP49765 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
VEGFBP49765 KRT18P33-201ENST00000398525 1043 ntBASIC16.35■□□□□ 0.21
VEGFBP49765 U3.41-201ENST00000408711 219 ntBASIC16.35■□□□□ 0.21
VEGFBP49765 WDR54-202ENST00000409791 854 ntTSL 3 BASIC16.35■□□□□ 0.21
VEGFBP49765 ACTBP14-201ENST00000411655 1089 ntBASIC16.35■□□□□ 0.21
VEGFBP49765 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC16.35■□□□□ 0.21
VEGFBP49765 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC16.35■□□□□ 0.21
VEGFBP49765 TPT1P11-201ENST00000458482 498 ntBASIC16.35■□□□□ 0.21
VEGFBP49765 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VEGFBP49765 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC16.35■□□□□ 0.21
VEGFBP49765 AL450346.2-201ENST00000495602 1024 ntBASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms