Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.96□□□□□ -0.18
CLK1P49759 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLK1P49759 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLK1P49759 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CLK1P49759 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLK1P49759 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CLK1P49759 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CLK1P49759 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLK1P49759 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 AC007541.1-201ENST00000570282 1469 ntBASIC13.95□□□□□ -0.18
CLK1P49759 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CLK1P49759 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.95□□□□□ -0.18
CLK1P49759 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 GAPDHP40-201ENST00000505218 1006 ntBASIC13.95□□□□□ -0.18
CLK1P49759 TERF1P3-201ENST00000505638 1227 ntBASIC13.95□□□□□ -0.18
CLK1P49759 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.95□□□□□ -0.18
CLK1P49759 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.95□□□□□ -0.18
CLK1P49759 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.95□□□□□ -0.18
CLK1P49759 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.95□□□□□ -0.18
CLK1P49759 AC093813.1-201ENST00000605066 256 ntBASIC13.95□□□□□ -0.18
CLK1P49759 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLK1P49759 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
CLK1P49759 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CLK1P49759 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.95□□□□□ -0.18
CLK1P49759 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 PPT1-213ENST00000641319 2388 ntBASIC13.95□□□□□ -0.18
CLK1P49759 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CLK1P49759 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLK1P49759 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLK1P49759 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.95□□□□□ -0.18
CLK1P49759 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.95□□□□□ -0.18
CLK1P49759 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CLK1P49759 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLK1P49759 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.94□□□□□ -0.18
CLK1P49759 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CLK1P49759 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.94□□□□□ -0.18
CLK1P49759 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.94□□□□□ -0.18
CLK1P49759 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.94□□□□□ -0.18
CLK1P49759 AL442647.2-201ENST00000429864 857 ntBASIC13.94□□□□□ -0.18
CLK1P49759 AC026410.3-201ENST00000514280 936 ntBASIC13.94□□□□□ -0.18
CLK1P49759 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.94□□□□□ -0.18
CLK1P49759 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CLK1P49759 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.94□□□□□ -0.18
CLK1P49759 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.94□□□□□ -0.18
CLK1P49759 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.94□□□□□ -0.18
CLK1P49759 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.94□□□□□ -0.18
CLK1P49759 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLK1P49759 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.94□□□□□ -0.18
CLK1P49759 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.94□□□□□ -0.18
CLK1P49759 AC015802.1-201ENST00000588104 1449 ntBASIC13.94□□□□□ -0.18
CLK1P49759 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms