Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC131206.1-201ENST00000538078 1211 ntBASIC12.99□□□□□ -0.33
CX3CR1P49238 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CR1P49238 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CR1P49238 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CR1P49238 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CR1P49238 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.99□□□□□ -0.33
CX3CR1P49238 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CX3CR1P49238 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CR1P49238 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CX3CR1P49238 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CR1P49238 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CX3CR1P49238 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.99□□□□□ -0.33
CX3CR1P49238 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CR1P49238 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 MSTO2P-201ENST00000314835 1709 ntBASIC12.99□□□□□ -0.33
CX3CR1P49238 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CR1P49238 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CX3CR1P49238 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CX3CR1P49238 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CX3CR1P49238 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.99□□□□□ -0.33
CX3CR1P49238 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CX3CR1P49238 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 PTENP1-202ENST00000532280 3996 ntBASIC12.98□□□□□ -0.33
CX3CR1P49238 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CX3CR1P49238 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CX3CR1P49238 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.98□□□□□ -0.33
CX3CR1P49238 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.98□□□□□ -0.33
CX3CR1P49238 AC245100.3-201ENST00000441281 285 ntBASIC12.98□□□□□ -0.33
CX3CR1P49238 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.98□□□□□ -0.33
CX3CR1P49238 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.98□□□□□ -0.33
CX3CR1P49238 PTP4A1P2-201ENST00000546033 454 ntBASIC12.98□□□□□ -0.33
CX3CR1P49238 TP53TG3HP-202ENST00000569755 579 ntBASIC12.98□□□□□ -0.33
CX3CR1P49238 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CR1P49238 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CX3CR1P49238 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CX3CR1P49238 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CX3CR1P49238 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CR1P49238 AC015688.4-201ENST00000580780 1647 ntBASIC12.98□□□□□ -0.33
CX3CR1P49238 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.98□□□□□ -0.33
CX3CR1P49238 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
CX3CR1P49238 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CX3CR1P49238 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CX3CR1P49238 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CX3CR1P49238 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.97□□□□□ -0.33
CX3CR1P49238 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CX3CR1P49238 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CX3CR1P49238 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms