Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
LTBRP36941 AL365203.3-201ENST00000609742 2057 ntBASIC14.81□□□□□ -0.04
LTBRP36941 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 AC008536.3-201ENST00000623282 1599 ntBASIC14.81□□□□□ -0.04
LTBRP36941 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LTBRP36941 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBRP36941 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LTBRP36941 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 CCT8L1P-201ENST00000465400 1674 ntBASIC14.81□□□□□ -0.04
LTBRP36941 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBRP36941 AC136621.1-201ENST00000624017 2304 ntBASIC14.81□□□□□ -0.04
LTBRP36941 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.81□□□□□ -0.04
LTBRP36941 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.81□□□□□ -0.04
LTBRP36941 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBRP36941 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LTBRP36941 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LTBRP36941 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LTBRP36941 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 AL157823.1-201ENST00000403727 628 ntBASIC14.81□□□□□ -0.04
LTBRP36941 IFNWP2-201ENST00000431203 580 ntBASIC14.81□□□□□ -0.04
LTBRP36941 NRADDP-201ENST00000437305 691 ntBASIC14.81□□□□□ -0.04
LTBRP36941 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC14.81□□□□□ -0.04
LTBRP36941 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.81□□□□□ -0.04
LTBRP36941 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBRP36941 AC005586.2-201ENST00000563946 837 ntBASIC14.81□□□□□ -0.04
LTBRP36941 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC14.81□□□□□ -0.04
LTBRP36941 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.81□□□□□ -0.04
LTBRP36941 AC073869.4-201ENST00000620841 800 ntBASIC14.81□□□□□ -0.04
LTBRP36941 AC110057.1-201ENST00000636031 898 ntBASIC14.81□□□□□ -0.04
LTBRP36941 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
LTBRP36941 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBRP36941 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.81□□□□□ -0.04
LTBRP36941 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LTBRP36941 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.81□□□□□ -0.04
LTBRP36941 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBRP36941 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LTBRP36941 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LTBRP36941 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
LTBRP36941 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LTBRP36941 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.8□□□□□ -0.04
LTBRP36941 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBRP36941 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.8□□□□□ -0.04
LTBRP36941 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LTBRP36941 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBRP36941 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LTBRP36941 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC14.8□□□□□ -0.04
LTBRP36941 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.8□□□□□ -0.04
LTBRP36941 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LTBRP36941 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBRP36941 AC025594.1-201ENST00000469533 543 ntBASIC14.8□□□□□ -0.04
LTBRP36941 AC113347.2-201ENST00000512350 279 ntBASIC14.8□□□□□ -0.04
LTBRP36941 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.8□□□□□ -0.04
LTBRP36941 PMEL-214ENST00000550447 901 ntTSL 3 BASIC14.8□□□□□ -0.04
LTBRP36941 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.8□□□□□ -0.04
LTBRP36941 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.8□□□□□ -0.04
LTBRP36941 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.8□□□□□ -0.04
LTBRP36941 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LTBRP36941 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.8□□□□□ -0.04
LTBRP36941 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 CR392039.1-201ENST00000623217 204 ntBASIC14.8□□□□□ -0.04
LTBRP36941 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
LTBRP36941 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LTBRP36941 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC14.8□□□□□ -0.04
LTBRP36941 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBRP36941 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBRP36941 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBRP36941 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBRP36941 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBRP36941 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBRP36941 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms