Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GDF1P27539 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.34□□□□□ -0.27
GDF1P27539 AC005077.2-201ENST00000449786 690 ntBASIC13.34□□□□□ -0.27
GDF1P27539 HIST2H2BC-201ENST00000498492 580 ntBASIC13.34□□□□□ -0.27
GDF1P27539 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.34□□□□□ -0.27
GDF1P27539 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.34□□□□□ -0.27
GDF1P27539 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.34□□□□□ -0.27
GDF1P27539 RBM8B-201ENST00000555532 525 ntBASIC13.34□□□□□ -0.27
GDF1P27539 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 AC068587.8-201ENST00000641239 219 ntBASIC13.34□□□□□ -0.27
GDF1P27539 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
GDF1P27539 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GDF1P27539 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 AC015688.4-201ENST00000580780 1647 ntBASIC13.34□□□□□ -0.27
GDF1P27539 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 INTS4P1-203ENST00000641008 3683 ntBASIC13.34□□□□□ -0.27
GDF1P27539 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
GDF1P27539 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.33□□□□□ -0.27
GDF1P27539 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
GDF1P27539 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GDF1P27539 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
GDF1P27539 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
GDF1P27539 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.33□□□□□ -0.28
GDF1P27539 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 MBLAC2-202ENST00000514906 1936 ntBASIC13.33□□□□□ -0.28
GDF1P27539 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.33□□□□□ -0.28
GDF1P27539 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.33□□□□□ -0.28
GDF1P27539 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.33□□□□□ -0.28
GDF1P27539 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
GDF1P27539 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.33□□□□□ -0.28
GDF1P27539 MIR769-201ENST00000390225 118 ntBASIC13.33□□□□□ -0.28
GDF1P27539 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.33□□□□□ -0.28
GDF1P27539 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.33□□□□□ -0.28
GDF1P27539 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.33□□□□□ -0.28
GDF1P27539 AC016700.1-201ENST00000429424 312 ntBASIC13.33□□□□□ -0.28
GDF1P27539 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.33□□□□□ -0.28
GDF1P27539 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.33□□□□□ -0.28
GDF1P27539 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.33□□□□□ -0.28
GDF1P27539 Z98259.2-201ENST00000641583 609 ntBASIC13.33□□□□□ -0.28
GDF1P27539 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.33□□□□□ -0.28
GDF1P27539 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
GDF1P27539 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.33□□□□□ -0.28
GDF1P27539 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.33□□□□□ -0.28
GDF1P27539 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.33□□□□□ -0.28
GDF1P27539 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GDF1P27539 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
GDF1P27539 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
GDF1P27539 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.32□□□□□ -0.28
GDF1P27539 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.32□□□□□ -0.28
GDF1P27539 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.32□□□□□ -0.28
GDF1P27539 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GDF1P27539 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GDF1P27539 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.32□□□□□ -0.28
GDF1P27539 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GDF1P27539 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GDF1P27539 FGD5P1-202ENST00000614866 2498 ntBASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms