Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 KRT8P29-201ENST00000420409 1371 ntBASIC14.87□□□□□ -0.03
XPAP23025 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.87□□□□□ -0.03
XPAP23025 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.87□□□□□ -0.03
XPAP23025 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.87□□□□□ -0.03
XPAP23025 E2F3P2-201ENST00000447755 1422 ntBASIC14.87□□□□□ -0.03
XPAP23025 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
XPAP23025 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
XPAP23025 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.87□□□□□ -0.03
XPAP23025 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.87□□□□□ -0.03
XPAP23025 AC010141.1-201ENST00000411585 623 ntBASIC14.87□□□□□ -0.03
XPAP23025 FAM58BP-201ENST00000439056 645 ntBASIC14.87□□□□□ -0.03
XPAP23025 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.87□□□□□ -0.03
XPAP23025 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.87□□□□□ -0.03
XPAP23025 TUBB8P8-201ENST00000458717 1058 ntBASIC14.87□□□□□ -0.03
XPAP23025 AC099548.2-209ENST00000480264 625 ntBASIC14.87□□□□□ -0.03
XPAP23025 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.87□□□□□ -0.03
XPAP23025 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.87□□□□□ -0.03
XPAP23025 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 GPR182-203ENST00000622922 591 ntBASIC14.87□□□□□ -0.03
XPAP23025 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
XPAP23025 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.87□□□□□ -0.03
XPAP23025 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
XPAP23025 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.87□□□□□ -0.03
XPAP23025 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 AC020907.1-201ENST00000616460 1350 ntBASIC14.86□□□□□ -0.03
XPAP23025 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
XPAP23025 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.86□□□□□ -0.03
XPAP23025 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
XPAP23025 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.86□□□□□ -0.03
XPAP23025 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.86□□□□□ -0.03
XPAP23025 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.86□□□□□ -0.03
XPAP23025 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 AC106794.1-201ENST00000506935 792 ntBASIC14.86□□□□□ -0.03
XPAP23025 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.86□□□□□ -0.03
XPAP23025 AC126915.1-201ENST00000522847 1038 ntBASIC14.86□□□□□ -0.03
XPAP23025 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.86□□□□□ -0.03
XPAP23025 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.86□□□□□ -0.03
XPAP23025 AC005730.2-201ENST00000564549 1184 ntBASIC14.86□□□□□ -0.03
XPAP23025 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.86□□□□□ -0.03
XPAP23025 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.86□□□□□ -0.03
XPAP23025 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
XPAP23025 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.86□□□□□ -0.03
XPAP23025 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.86□□□□□ -0.03
XPAP23025 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.86□□□□□ -0.03
XPAP23025 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
XPAP23025 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.86□□□□□ -0.03
XPAP23025 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
XPAP23025 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
XPAP23025 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 AC023824.1-201ENST00000562945 2975 ntBASIC14.85□□□□□ -0.03
XPAP23025 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.85□□□□□ -0.03
XPAP23025 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
XPAP23025 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
XPAP23025 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms