Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 AC215219.1-201ENST00000400706 1817 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CAPN3P20807 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
CAPN3P20807 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.22□□□□□ -0.13
CAPN3P20807 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.22□□□□□ -0.13
CAPN3P20807 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 SALL4P5-201ENST00000419001 1760 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
CAPN3P20807 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CAPN3P20807 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CAPN3P20807 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CAPN3P20807 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.22□□□□□ -0.13
CAPN3P20807 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.22□□□□□ -0.13
CAPN3P20807 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.22□□□□□ -0.13
CAPN3P20807 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CAPN3P20807 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 NUS1P3-201ENST00000423502 862 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 KRT223P-202ENST00000449164 1292 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 DOC2GP-202ENST00000514950 1163 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.22□□□□□ -0.13
CAPN3P20807 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.22□□□□□ -0.13
CAPN3P20807 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.22□□□□□ -0.13
CAPN3P20807 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.22□□□□□ -0.13
CAPN3P20807 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CAPN3P20807 AL512343.1-201ENST00000605837 169 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 AC008494.3-201ENST00000606615 944 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 AC004790.1-201ENST00000612686 536 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 AC004840.1-201ENST00000636359 365 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 TCAF1P1-201ENST00000414990 2232 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 CICP20-201ENST00000443330 2801 ntBASIC14.22□□□□□ -0.13
CAPN3P20807 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.22□□□□□ -0.13
CAPN3P20807 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.22□□□□□ -0.13
CAPN3P20807 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CAPN3P20807 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CAPN3P20807 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.21□□□□□ -0.13
CAPN3P20807 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 AC015818.8-201ENST00000587907 1519 ntBASIC14.21□□□□□ -0.13
CAPN3P20807 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CAPN3P20807 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 HSPA8P5-201ENST00000456928 2069 ntBASIC14.21□□□□□ -0.13
CAPN3P20807 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.21□□□□□ -0.13
CAPN3P20807 AC003102.2-201ENST00000589195 1469 ntBASIC14.21□□□□□ -0.13
CAPN3P20807 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 FAM90A12P-201ENST00000519497 2375 ntBASIC14.21□□□□□ -0.13
CAPN3P20807 FAM90A24P-201ENST00000520792 2369 ntBASIC14.21□□□□□ -0.13
CAPN3P20807 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.21□□□□□ -0.13
CAPN3P20807 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.21□□□□□ -0.13
CAPN3P20807 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.21□□□□□ -0.13
CAPN3P20807 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CAPN3P20807 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 RARRES2P5-201ENST00000564013 466 ntBASIC14.21□□□□□ -0.13
CAPN3P20807 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.21□□□□□ -0.13
CAPN3P20807 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.21□□□□□ -0.13
CAPN3P20807 BX539320.1-201ENST00000623759 877 ntBASIC14.21□□□□□ -0.13
CAPN3P20807 AC068587.10-201ENST00000641210 219 ntBASIC14.21□□□□□ -0.13
CAPN3P20807 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.21□□□□□ -0.13
CAPN3P20807 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.21□□□□□ -0.13
CAPN3P20807 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CAPN3P20807 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CAPN3P20807 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.21□□□□□ -0.13
CAPN3P20807 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CAPN3P20807 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms