Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR1909-201ENST00000411312 80 ntBASIC14.87□□□□□ -0.03
HLA-DPA1P20036 AC026954.1-201ENST00000429771 1293 ntBASIC14.87□□□□□ -0.03
HLA-DPA1P20036 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 CHMP1AP1-201ENST00000445563 662 ntBASIC14.87□□□□□ -0.03
HLA-DPA1P20036 AL035414.1-201ENST00000451327 857 ntBASIC14.87□□□□□ -0.03
HLA-DPA1P20036 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DPA1P20036 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 AC010141.1-201ENST00000411585 623 ntBASIC14.86□□□□□ -0.03
HLA-DPA1P20036 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 AC090505.1-201ENST00000430515 1834 ntBASIC14.86□□□□□ -0.03
HLA-DPA1P20036 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 AC087386.2-201ENST00000623212 4637 ntBASIC14.86□□□□□ -0.03
HLA-DPA1P20036 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
HLA-DPA1P20036 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AC006504.5-208ENST00000588784 2401 ntBASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AC215219.1-201ENST00000400706 1817 ntBASIC14.85□□□□□ -0.03
HLA-DPA1P20036 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 ANKRD19P-201ENST00000338192 862 ntBASIC14.85□□□□□ -0.03
HLA-DPA1P20036 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.85□□□□□ -0.03
HLA-DPA1P20036 AC244107.1-201ENST00000442033 332 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms