Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.22■□□□□ 0.03
BRAFP15056 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
BRAFP15056 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.22■□□□□ 0.03
BRAFP15056 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRAFP15056 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
BRAFP15056 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.22■□□□□ 0.03
BRAFP15056 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
BRAFP15056 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.22■□□□□ 0.03
BRAFP15056 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.22■□□□□ 0.03
BRAFP15056 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRAFP15056 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
BRAFP15056 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRAFP15056 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRAFP15056 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRAFP15056 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRAFP15056 INTS4P2-202ENST00000614726 2019 ntBASIC15.22■□□□□ 0.03
BRAFP15056 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
BRAFP15056 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.22■□□□□ 0.03
BRAFP15056 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRAFP15056 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.22■□□□□ 0.03
BRAFP15056 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRAFP15056 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BRAFP15056 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 AL360270.3-201ENST00000609118 1348 ntBASIC15.21■□□□□ 0.03
BRAFP15056 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.21■□□□□ 0.03
BRAFP15056 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.21■□□□□ 0.03
BRAFP15056 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BRAFP15056 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
BRAFP15056 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.21■□□□□ 0.03
BRAFP15056 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
BRAFP15056 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.21■□□□□ 0.03
BRAFP15056 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.21■□□□□ 0.03
BRAFP15056 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.21■□□□□ 0.03
BRAFP15056 GIMAP3P-201ENST00000495150 836 ntBASIC15.21■□□□□ 0.03
BRAFP15056 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.21■□□□□ 0.03
BRAFP15056 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BRAFP15056 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
BRAFP15056 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
BRAFP15056 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.21■□□□□ 0.03
BRAFP15056 AC124283.3-201ENST00000570869 594 ntBASIC15.21■□□□□ 0.03
BRAFP15056 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.21■□□□□ 0.03
BRAFP15056 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.21■□□□□ 0.03
BRAFP15056 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
BRAFP15056 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRAFP15056 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BRAFP15056 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
BRAFP15056 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BRAFP15056 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
BRAFP15056 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.21■□□□□ 0.02
BRAFP15056 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BRAFP15056 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.2■□□□□ 0.02
BRAFP15056 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
BRAFP15056 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 AL157414.3-201ENST00000624276 1954 ntBASIC15.2■□□□□ 0.02
BRAFP15056 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC15.2■□□□□ 0.02
BRAFP15056 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 DRD5P1-201ENST00000456605 1438 ntBASIC15.2■□□□□ 0.02
BRAFP15056 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
BRAFP15056 AC012617.1-204ENST00000586340 2305 ntBASIC15.2■□□□□ 0.02
BRAFP15056 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.2■□□□□ 0.02
BRAFP15056 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
BRAFP15056 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.2■□□□□ 0.02
BRAFP15056 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.2■□□□□ 0.02
BRAFP15056 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
BRAFP15056 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.2■□□□□ 0.02
BRAFP15056 AC134915.1-201ENST00000426461 574 ntBASIC15.2■□□□□ 0.02
BRAFP15056 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.2■□□□□ 0.02
BRAFP15056 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.2■□□□□ 0.02
BRAFP15056 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BRAFP15056 AC120045.2-201ENST00000567334 178 ntBASIC15.2■□□□□ 0.02
BRAFP15056 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms