Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.96■□□□□ 0.95
CHGAP10645 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 AC015688.4-201ENST00000580780 1647 ntBASIC20.96■□□□□ 0.95
CHGAP10645 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CHGAP10645 AC091951.1-201ENST00000512854 2465 ntBASIC20.96■□□□□ 0.95
CHGAP10645 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHGAP10645 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC20.95■□□□□ 0.94
CHGAP10645 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHGAP10645 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 AC138035.3-201ENST00000622706 2791 ntBASIC20.95■□□□□ 0.94
CHGAP10645 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CHGAP10645 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHGAP10645 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC20.95■□□□□ 0.94
CHGAP10645 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CHGAP10645 AP000911.2-201ENST00000534330 502 ntBASIC20.95■□□□□ 0.94
CHGAP10645 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC20.95■□□□□ 0.94
CHGAP10645 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC20.95■□□□□ 0.94
CHGAP10645 AC138701.2-201ENST00000553634 226 ntBASIC20.95■□□□□ 0.94
CHGAP10645 AC141586.1-203ENST00000567242 366 ntBASIC20.95■□□□□ 0.94
CHGAP10645 MIR5196-201ENST00000578146 115 ntBASIC20.95■□□□□ 0.94
CHGAP10645 MIR6756-201ENST00000616240 63 ntBASIC20.95■□□□□ 0.94
CHGAP10645 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC20.95■□□□□ 0.94
CHGAP10645 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CHGAP10645 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC20.95■□□□□ 0.94
CHGAP10645 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC20.95■□□□□ 0.94
CHGAP10645 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC20.95■□□□□ 0.94
CHGAP10645 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHGAP10645 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHGAP10645 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGAP10645 API5-208ENST00000531273 1868 ntTSL 2 BASIC20.94■□□□□ 0.94
CHGAP10645 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHGAP10645 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.94■□□□□ 0.94
CHGAP10645 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.94■□□□□ 0.94
CHGAP10645 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC20.94■□□□□ 0.94
CHGAP10645 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CHGAP10645 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHGAP10645 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CHGAP10645 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGAP10645 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC20.94■□□□□ 0.94
CHGAP10645 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC20.94■□□□□ 0.94
CHGAP10645 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC20.94■□□□□ 0.94
CHGAP10645 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC20.94■□□□□ 0.94
CHGAP10645 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGAP10645 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGAP10645 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGAP10645 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.94■□□□□ 0.94
CHGAP10645 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGAP10645 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHGAP10645 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CHGAP10645 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHGAP10645 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CHGAP10645 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC20.93■□□□□ 0.94
CHGAP10645 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.93■□□□□ 0.94
CHGAP10645 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC20.93■□□□□ 0.94
CHGAP10645 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC20.93■□□□□ 0.94
CHGAP10645 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC20.93■□□□□ 0.94
CHGAP10645 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 MIR1227-201ENST00000408484 88 ntBASIC20.93■□□□□ 0.94
CHGAP10645 RNA5SP417-201ENST00000516459 108 ntBASIC20.93■□□□□ 0.94
CHGAP10645 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC20.93■□□□□ 0.94
CHGAP10645 KRT8P1-201ENST00000557533 1207 ntBASIC20.93■□□□□ 0.94
CHGAP10645 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC20.93■□□□□ 0.94
CHGAP10645 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC20.93■□□□□ 0.94
CHGAP10645 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CHGAP10645 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC20.93■□□□□ 0.94
CHGAP10645 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CHGAP10645 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC20.93■□□□□ 0.94
CHGAP10645 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHGAP10645 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms