Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 AC120114.3-201ENST00000611923 658 ntBASIC11.06□□□□□ -0.64
SMIM17P0DL12 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 DNM1P41-201ENST00000623634 3350 ntBASIC11.06□□□□□ -0.64
SMIM17P0DL12 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.06□□□□□ -0.64
SMIM17P0DL12 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMIM17P0DL12 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC11.06□□□□□ -0.64
SMIM17P0DL12 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 AC015922.1-201ENST00000421102 1152 ntBASIC11.05□□□□□ -0.64
SMIM17P0DL12 MCCD1P2-201ENST00000423228 335 ntBASIC11.05□□□□□ -0.64
SMIM17P0DL12 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 TPT1P11-201ENST00000458482 498 ntBASIC11.05□□□□□ -0.64
SMIM17P0DL12 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 AC007967.4-201ENST00000614700 386 ntBASIC11.05□□□□□ -0.64
SMIM17P0DL12 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMIM17P0DL12 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
SMIM17P0DL12 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms