Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.7■□□□□ 0.42
APPP05067 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
APPP05067 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
APPP05067 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 PUDPP3-201ENST00000445368 636 ntBASIC17.7■□□□□ 0.42
APPP05067 AL591846.1-201ENST00000451736 433 ntBASIC17.7■□□□□ 0.42
APPP05067 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.7■□□□□ 0.42
APPP05067 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.7■□□□□ 0.42
APPP05067 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.7■□□□□ 0.42
APPP05067 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.7■□□□□ 0.42
APPP05067 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC17.7■□□□□ 0.42
APPP05067 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.7■□□□□ 0.42
APPP05067 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
APPP05067 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
APPP05067 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.7■□□□□ 0.42
APPP05067 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.7■□□□□ 0.42
APPP05067 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
APPP05067 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.69■□□□□ 0.42
APPP05067 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
APPP05067 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.69■□□□□ 0.42
APPP05067 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.69■□□□□ 0.42
APPP05067 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.69■□□□□ 0.42
APPP05067 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
APPP05067 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
APPP05067 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
APPP05067 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.69■□□□□ 0.42
APPP05067 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.69■□□□□ 0.42
APPP05067 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
APPP05067 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.69■□□□□ 0.42
APPP05067 HSPB1P2-201ENST00000448722 546 ntBASIC17.69■□□□□ 0.42
APPP05067 AC104306.2-201ENST00000451877 341 ntBASIC17.69■□□□□ 0.42
APPP05067 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.69■□□□□ 0.42
APPP05067 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.69■□□□□ 0.42
APPP05067 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.69■□□□□ 0.42
APPP05067 AL118558.3-201ENST00000607414 1079 ntBASIC17.69■□□□□ 0.42
APPP05067 AC005695.3-201ENST00000614522 232 ntBASIC17.69■□□□□ 0.42
APPP05067 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.69■□□□□ 0.42
APPP05067 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
APPP05067 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
APPP05067 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.69■□□□□ 0.42
APPP05067 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
APPP05067 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.69■□□□□ 0.42
APPP05067 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
APPP05067 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.68■□□□□ 0.42
APPP05067 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
APPP05067 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.68■□□□□ 0.42
APPP05067 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
APPP05067 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.68■□□□□ 0.42
APPP05067 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.68■□□□□ 0.42
APPP05067 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.68■□□□□ 0.42
APPP05067 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
APPP05067 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.68■□□□□ 0.42
APPP05067 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.68■□□□□ 0.42
APPP05067 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
APPP05067 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
APPP05067 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.68■□□□□ 0.42
APPP05067 AC021723.1-201ENST00000486306 515 ntBASIC17.68■□□□□ 0.42
APPP05067 ALG3P1-201ENST00000508806 1114 ntBASIC17.68■□□□□ 0.42
APPP05067 FAM8A2P-201ENST00000528813 1142 ntBASIC17.68■□□□□ 0.42
APPP05067 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.68■□□□□ 0.42
APPP05067 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms