Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.96□□□□□ -0.17
MT-ND1P03886 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
MT-ND1P03886 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.96□□□□□ -0.17
MT-ND1P03886 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
MT-ND1P03886 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.96□□□□□ -0.18
MT-ND1P03886 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ND1P03886 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ND1P03886 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ND1P03886 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
MT-ND1P03886 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ND1P03886 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
MT-ND1P03886 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
MT-ND1P03886 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
MT-ND1P03886 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.95□□□□□ -0.18
MT-ND1P03886 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 BTBD7P1-201ENST00000447253 1453 ntBASIC13.95□□□□□ -0.18
MT-ND1P03886 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
MT-ND1P03886 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.95□□□□□ -0.18
MT-ND1P03886 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.95□□□□□ -0.18
MT-ND1P03886 AC241585.1-201ENST00000433527 519 ntBASIC13.95□□□□□ -0.18
MT-ND1P03886 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.95□□□□□ -0.18
MT-ND1P03886 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.95□□□□□ -0.18
MT-ND1P03886 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.95□□□□□ -0.18
MT-ND1P03886 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.95□□□□□ -0.18
MT-ND1P03886 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.95□□□□□ -0.18
MT-ND1P03886 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
MT-ND1P03886 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
MT-ND1P03886 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.95□□□□□ -0.18
MT-ND1P03886 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.95□□□□□ -0.18
MT-ND1P03886 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.95□□□□□ -0.18
MT-ND1P03886 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 AC004241.5-201ENST00000623870 2448 ntBASIC13.95□□□□□ -0.18
MT-ND1P03886 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 AC073548.1-201ENST00000624088 1882 ntBASIC13.95□□□□□ -0.18
MT-ND1P03886 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 DMBT1P1-203ENST00000636837 4628 ntBASIC13.95□□□□□ -0.18
MT-ND1P03886 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.95□□□□□ -0.18
MT-ND1P03886 TCAM1P-207ENST00000485295 1537 ntBASIC13.95□□□□□ -0.18
MT-ND1P03886 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MT-ND1P03886 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
MT-ND1P03886 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
MT-ND1P03886 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 AL157996.1-201ENST00000624684 2299 ntBASIC13.94□□□□□ -0.18
MT-ND1P03886 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.94□□□□□ -0.18
MT-ND1P03886 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.94□□□□□ -0.18
MT-ND1P03886 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MT-ND1P03886 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.94□□□□□ -0.18
MT-ND1P03886 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
MT-ND1P03886 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
MT-ND1P03886 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
MT-ND1P03886 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.94□□□□□ -0.18
MT-ND1P03886 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MT-ND1P03886 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.94□□□□□ -0.18
MT-ND1P03886 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MT-ND1P03886 MIR943-201ENST00000401286 94 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms