Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.41□□□□□ -0.1
SIX3O95343 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX3O95343 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 TERF1P3-201ENST00000505638 1227 ntBASIC14.41□□□□□ -0.1
SIX3O95343 AC068587.3-201ENST00000526613 355 ntBASIC14.41□□□□□ -0.1
SIX3O95343 PTP4A1P2-201ENST00000546033 454 ntBASIC14.41□□□□□ -0.1
SIX3O95343 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX3O95343 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.41□□□□□ -0.1
SIX3O95343 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX3O95343 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SIX3O95343 MIR6074-201ENST00000612054 107 ntBASIC14.41□□□□□ -0.1
SIX3O95343 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX3O95343 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
SIX3O95343 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX3O95343 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX3O95343 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SIX3O95343 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX3O95343 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX3O95343 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.41□□□□□ -0.1
SIX3O95343 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.41□□□□□ -0.1
SIX3O95343 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SIX3O95343 PTENP1-202ENST00000532280 3996 ntBASIC14.41□□□□□ -0.1
SIX3O95343 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SIX3O95343 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
SIX3O95343 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX3O95343 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
SIX3O95343 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX3O95343 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
SIX3O95343 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SIX3O95343 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.4□□□□□ -0.1
SIX3O95343 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX3O95343 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX3O95343 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.4□□□□□ -0.1
SIX3O95343 FTLP10-202ENST00000505798 471 ntBASIC14.4□□□□□ -0.1
SIX3O95343 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.4□□□□□ -0.1
SIX3O95343 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SIX3O95343 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.4□□□□□ -0.1
SIX3O95343 RN7SL48P-201ENST00000579283 293 ntBASIC14.4□□□□□ -0.1
SIX3O95343 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.4□□□□□ -0.1
SIX3O95343 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.4□□□□□ -0.1
SIX3O95343 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.4□□□□□ -0.1
SIX3O95343 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX3O95343 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SIX3O95343 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SIX3O95343 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX3O95343 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SIX3O95343 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.4□□□□□ -0.1
SIX3O95343 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SIX3O95343 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX3O95343 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SIX3O95343 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 KRT8P24-201ENST00000560290 1559 ntBASIC14.39□□□□□ -0.11
SIX3O95343 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SIX3O95343 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.39□□□□□ -0.11
SIX3O95343 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.39□□□□□ -0.11
SIX3O95343 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
SIX3O95343 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SIX3O95343 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms