Protein–RNA interactions for Protein: O94876

TMCC1, Transmembrane and coiled-coil domains protein 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1O94876 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.21■□□□□ 0.03
TMCC1O94876 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.21■□□□□ 0.03
TMCC1O94876 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMCC1O94876 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.21■□□□□ 0.03
TMCC1O94876 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMCC1O94876 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.21■□□□□ 0.03
TMCC1O94876 AC117489.1-201ENST00000625169 3217 ntBASIC15.21■□□□□ 0.03
TMCC1O94876 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMCC1O94876 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TMCC1O94876 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TMCC1O94876 AC009093.2-202ENST00000620513 2079 ntBASIC15.21■□□□□ 0.03
TMCC1O94876 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.21■□□□□ 0.03
TMCC1O94876 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.21■□□□□ 0.03
TMCC1O94876 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
TMCC1O94876 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TMCC1O94876 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMCC1O94876 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.02
TMCC1O94876 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.21■□□□□ 0.02
TMCC1O94876 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMCC1O94876 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TMCC1O94876 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TMCC1O94876 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMCC1O94876 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMCC1O94876 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TMCC1O94876 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.2■□□□□ 0.02
TMCC1O94876 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.2■□□□□ 0.02
TMCC1O94876 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.2■□□□□ 0.02
TMCC1O94876 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.2■□□□□ 0.02
TMCC1O94876 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.2■□□□□ 0.02
TMCC1O94876 HOMER2P2-201ENST00000451621 847 ntBASIC15.2■□□□□ 0.02
TMCC1O94876 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.2■□□□□ 0.02
TMCC1O94876 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.2■□□□□ 0.02
TMCC1O94876 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.2■□□□□ 0.02
TMCC1O94876 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.2■□□□□ 0.02
TMCC1O94876 AL583810.1-201ENST00000553344 1045 ntBASIC15.2■□□□□ 0.02
TMCC1O94876 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.2■□□□□ 0.02
TMCC1O94876 MIR4741-201ENST00000579822 90 ntBASIC15.2■□□□□ 0.02
TMCC1O94876 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.2■□□□□ 0.02
TMCC1O94876 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.2■□□□□ 0.02
TMCC1O94876 KRT8P4-201ENST00000509735 1454 ntBASIC15.2■□□□□ 0.02
TMCC1O94876 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TMCC1O94876 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TMCC1O94876 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.19■□□□□ 0.02
TMCC1O94876 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TMCC1O94876 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TMCC1O94876 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TMCC1O94876 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TMCC1O94876 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.19■□□□□ 0.02
TMCC1O94876 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TMCC1O94876 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 AC004945.1-201ENST00000416738 983 ntBASIC15.19■□□□□ 0.02
TMCC1O94876 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.19■□□□□ 0.02
TMCC1O94876 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.19■□□□□ 0.02
TMCC1O94876 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TMCC1O94876 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.19■□□□□ 0.02
TMCC1O94876 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.19■□□□□ 0.02
TMCC1O94876 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.19■□□□□ 0.02
TMCC1O94876 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.19■□□□□ 0.02
TMCC1O94876 ZACNP1-201ENST00000612259 710 ntBASIC15.19■□□□□ 0.02
TMCC1O94876 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 AL033527.4-201ENST00000641026 673 ntBASIC15.19■□□□□ 0.02
TMCC1O94876 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TMCC1O94876 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.19■□□□□ 0.02
TMCC1O94876 AL023775.1-201ENST00000454907 1746 ntBASIC15.19■□□□□ 0.02
TMCC1O94876 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms