Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.84□□□□□ -0.03
GPC4O75487 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.84□□□□□ -0.03
GPC4O75487 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.84□□□□□ -0.03
GPC4O75487 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
GPC4O75487 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
GPC4O75487 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
GPC4O75487 AL138709.1-201ENST00000614840 1693 ntBASIC14.84□□□□□ -0.03
GPC4O75487 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GPC4O75487 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GPC4O75487 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.83□□□□□ -0.03
GPC4O75487 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
GPC4O75487 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GPC4O75487 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
GPC4O75487 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
GPC4O75487 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
GPC4O75487 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GPC4O75487 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GPC4O75487 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
GPC4O75487 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
GPC4O75487 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
GPC4O75487 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.83□□□□□ -0.03
GPC4O75487 AP001267.2-201ENST00000532619 2086 ntBASIC14.83□□□□□ -0.03
GPC4O75487 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
GPC4O75487 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
GPC4O75487 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
GPC4O75487 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.83□□□□□ -0.04
GPC4O75487 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
GPC4O75487 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
GPC4O75487 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
GPC4O75487 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.83□□□□□ -0.04
GPC4O75487 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.83□□□□□ -0.04
GPC4O75487 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.83□□□□□ -0.04
GPC4O75487 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
GPC4O75487 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.83□□□□□ -0.04
GPC4O75487 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.83□□□□□ -0.04
GPC4O75487 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.83□□□□□ -0.04
GPC4O75487 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.83□□□□□ -0.04
GPC4O75487 BTNL10-201ENST00000595971 695 ntBASIC14.83□□□□□ -0.04
GPC4O75487 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.83□□□□□ -0.04
GPC4O75487 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
GPC4O75487 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
GPC4O75487 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.83□□□□□ -0.04
GPC4O75487 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
GPC4O75487 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GPC4O75487 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.83□□□□□ -0.04
GPC4O75487 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GPC4O75487 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.82□□□□□ -0.04
GPC4O75487 AC092933.1-201ENST00000393644 945 ntBASIC14.82□□□□□ -0.04
GPC4O75487 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
GPC4O75487 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
GPC4O75487 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.82□□□□□ -0.04
GPC4O75487 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.82□□□□□ -0.04
GPC4O75487 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GPC4O75487 GAPDHP21-201ENST00000450301 1010 ntBASIC14.82□□□□□ -0.04
GPC4O75487 AC106760.1-201ENST00000508690 800 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms