Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH4O75427 AC064801.2-201ENST00000625052 1303 ntBASIC15.28■□□□□ 0.04
LRCH4O75427 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH4O75427 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 MIR326-201ENST00000362220 95 ntBASIC15.28■□□□□ 0.04
LRCH4O75427 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
LRCH4O75427 AC234783.1-201ENST00000441761 496 ntBASIC15.28■□□□□ 0.04
LRCH4O75427 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH4O75427 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.28■□□□□ 0.04
LRCH4O75427 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 AC008687.7-202ENST00000637404 953 ntBASIC15.28■□□□□ 0.04
LRCH4O75427 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH4O75427 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.28■□□□□ 0.04
LRCH4O75427 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.28■□□□□ 0.04
LRCH4O75427 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRCH4O75427 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH4O75427 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH4O75427 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.27■□□□□ 0.04
LRCH4O75427 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
LRCH4O75427 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.27■□□□□ 0.04
LRCH4O75427 HOMER2P2-201ENST00000451621 847 ntBASIC15.27■□□□□ 0.04
LRCH4O75427 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH4O75427 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.27■□□□□ 0.04
LRCH4O75427 SNX29P1-201ENST00000548357 1007 ntBASIC15.27■□□□□ 0.04
LRCH4O75427 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.27■□□□□ 0.04
LRCH4O75427 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.27■□□□□ 0.04
LRCH4O75427 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.27■□□□□ 0.04
LRCH4O75427 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRCH4O75427 AL359881.2-201ENST00000602973 570 ntBASIC15.27■□□□□ 0.04
LRCH4O75427 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.27■□□□□ 0.04
LRCH4O75427 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH4O75427 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRCH4O75427 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH4O75427 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
LRCH4O75427 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRCH4O75427 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LRCH4O75427 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LRCH4O75427 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH4O75427 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH4O75427 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LRCH4O75427 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH4O75427 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH4O75427 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH4O75427 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH4O75427 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH4O75427 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.27■□□□□ 0.03
LRCH4O75427 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH4O75427 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH4O75427 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH4O75427 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LRCH4O75427 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH4O75427 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH4O75427 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH4O75427 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LRCH4O75427 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH4O75427 OR8S1-201ENST00000310194 1080 ntBASIC15.26■□□□□ 0.03
LRCH4O75427 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH4O75427 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH4O75427 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH4O75427 MIR1909-201ENST00000411312 80 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms