Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SEC22BO75396 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SEC22BO75396 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.24□□□□□ -0.13
SEC22BO75396 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SEC22BO75396 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC22BO75396 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.24□□□□□ -0.13
SEC22BO75396 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.24□□□□□ -0.13
SEC22BO75396 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC22BO75396 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SEC22BO75396 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 AC011840.2-201ENST00000563063 1520 ntBASIC14.24□□□□□ -0.13
SEC22BO75396 AC215219.1-201ENST00000400706 1817 ntBASIC14.24□□□□□ -0.13
SEC22BO75396 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SEC22BO75396 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SEC22BO75396 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SEC22BO75396 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.24□□□□□ -0.13
SEC22BO75396 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SEC22BO75396 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SEC22BO75396 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC22BO75396 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SEC22BO75396 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SEC22BO75396 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.23□□□□□ -0.13
SEC22BO75396 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SEC22BO75396 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SEC22BO75396 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC22BO75396 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.23□□□□□ -0.13
SEC22BO75396 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SEC22BO75396 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 AC027796.2-201ENST00000575326 344 ntBASIC14.23□□□□□ -0.13
SEC22BO75396 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC22BO75396 MIR6074-201ENST00000612054 107 ntBASIC14.23□□□□□ -0.13
SEC22BO75396 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SEC22BO75396 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC22BO75396 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SEC22BO75396 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SEC22BO75396 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SEC22BO75396 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SEC22BO75396 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC22BO75396 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC22BO75396 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.23□□□□□ -0.13
SEC22BO75396 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.23□□□□□ -0.13
SEC22BO75396 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SEC22BO75396 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms