Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDCD6O75340 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
PDCD6O75340 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDCD6O75340 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
PDCD6O75340 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
PDCD6O75340 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PDCD6O75340 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.46□□□□□ -0.41
PDCD6O75340 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 AC139712.1-201ENST00000378256 1875 ntBASIC12.46□□□□□ -0.41
PDCD6O75340 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.46□□□□□ -0.41
PDCD6O75340 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
PDCD6O75340 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.46□□□□□ -0.41
PDCD6O75340 HSPA8P5-201ENST00000456928 2069 ntBASIC12.46□□□□□ -0.41
PDCD6O75340 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
PDCD6O75340 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
PDCD6O75340 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
PDCD6O75340 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.46□□□□□ -0.41
PDCD6O75340 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.46□□□□□ -0.41
PDCD6O75340 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.46□□□□□ -0.41
PDCD6O75340 AL162726.2-201ENST00000438986 1017 ntBASIC12.46□□□□□ -0.41
PDCD6O75340 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.46□□□□□ -0.41
PDCD6O75340 AC245100.3-201ENST00000441281 285 ntBASIC12.46□□□□□ -0.41
PDCD6O75340 MYCLP2-201ENST00000449268 967 ntBASIC12.46□□□□□ -0.41
PDCD6O75340 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.46□□□□□ -0.41
PDCD6O75340 INGX-202ENST00000489074 768 ntBASIC12.46□□□□□ -0.41
PDCD6O75340 AC022137.2-201ENST00000503482 481 ntBASIC12.46□□□□□ -0.41
PDCD6O75340 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.46□□□□□ -0.41
PDCD6O75340 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.46□□□□□ -0.41
PDCD6O75340 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.46□□□□□ -0.41
PDCD6O75340 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
PDCD6O75340 AL132655.2-201ENST00000596276 594 ntBASIC12.46□□□□□ -0.41
PDCD6O75340 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.46□□□□□ -0.41
PDCD6O75340 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.46□□□□□ -0.41
PDCD6O75340 AP001002.3-201ENST00000623482 206 ntBASIC12.46□□□□□ -0.41
PDCD6O75340 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.46□□□□□ -0.41
PDCD6O75340 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PDCD6O75340 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
PDCD6O75340 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.46□□□□□ -0.42
PDCD6O75340 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.46□□□□□ -0.42
PDCD6O75340 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PDCD6O75340 AC089987.1-201ENST00000551654 2209 ntBASIC12.46□□□□□ -0.42
PDCD6O75340 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PDCD6O75340 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
PDCD6O75340 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.46□□□□□ -0.42
PDCD6O75340 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
PDCD6O75340 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.46□□□□□ -0.42
PDCD6O75340 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.46□□□□□ -0.42
PDCD6O75340 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
PDCD6O75340 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PDCD6O75340 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.45□□□□□ -0.42
PDCD6O75340 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.45□□□□□ -0.42
PDCD6O75340 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.45□□□□□ -0.42
PDCD6O75340 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.45□□□□□ -0.42
PDCD6O75340 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
PDCD6O75340 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
PDCD6O75340 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PDCD6O75340 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
PDCD6O75340 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms