Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.85□□□□□ -0.19
HCN1O60741 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.85□□□□□ -0.19
HCN1O60741 AL583810.1-201ENST00000553344 1045 ntBASIC13.85□□□□□ -0.19
HCN1O60741 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.85□□□□□ -0.19
HCN1O60741 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.85□□□□□ -0.19
HCN1O60741 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.85□□□□□ -0.19
HCN1O60741 AC008687.7-202ENST00000637404 953 ntBASIC13.85□□□□□ -0.19
HCN1O60741 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.85□□□□□ -0.19
HCN1O60741 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HCN1O60741 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HCN1O60741 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
HCN1O60741 LINC01230-201ENST00000625222 3017 ntBASIC13.85□□□□□ -0.19
HCN1O60741 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HCN1O60741 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.85□□□□□ -0.19
HCN1O60741 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HCN1O60741 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.84□□□□□ -0.19
HCN1O60741 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 AC113367.3-201ENST00000508316 1912 ntBASIC13.84□□□□□ -0.19
HCN1O60741 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 RNU1-114P-201ENST00000365297 166 ntBASIC13.84□□□□□ -0.19
HCN1O60741 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
HCN1O60741 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
HCN1O60741 AL139094.1-201ENST00000405549 1188 ntBASIC13.84□□□□□ -0.19
HCN1O60741 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
HCN1O60741 CD8B2-202ENST00000417670 633 ntBASIC13.84□□□□□ -0.19
HCN1O60741 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 AC092658.1-201ENST00000505836 891 ntBASIC13.84□□□□□ -0.19
HCN1O60741 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.84□□□□□ -0.19
HCN1O60741 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.84□□□□□ -0.19
HCN1O60741 RN7SL48P-201ENST00000579283 293 ntBASIC13.84□□□□□ -0.19
HCN1O60741 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HCN1O60741 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 AL928921.2-201ENST00000641325 2442 ntBASIC13.84□□□□□ -0.19
HCN1O60741 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.84□□□□□ -0.19
HCN1O60741 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HCN1O60741 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HCN1O60741 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
HCN1O60741 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HCN1O60741 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HCN1O60741 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
HCN1O60741 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
HCN1O60741 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms