Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
EXTL3O43909 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
EXTL3O43909 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
EXTL3O43909 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.91■□□□□ 0.14
EXTL3O43909 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.91■□□□□ 0.14
EXTL3O43909 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.91■□□□□ 0.14
EXTL3O43909 RNMTL1P1-201ENST00000454103 560 ntBASIC15.91■□□□□ 0.14
EXTL3O43909 RBM8B-201ENST00000555532 525 ntBASIC15.91■□□□□ 0.14
EXTL3O43909 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.91■□□□□ 0.14
EXTL3O43909 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 AC005962.1-201ENST00000584100 773 ntBASIC15.91■□□□□ 0.14
EXTL3O43909 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.91■□□□□ 0.14
EXTL3O43909 AC022748.3-201ENST00000621828 275 ntBASIC15.91■□□□□ 0.14
EXTL3O43909 AC126755.1-201ENST00000525846 6405 ntBASIC15.91■□□□□ 0.14
EXTL3O43909 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
EXTL3O43909 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.91■□□□□ 0.14
EXTL3O43909 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.91■□□□□ 0.14
EXTL3O43909 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.91■□□□□ 0.14
EXTL3O43909 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EXTL3O43909 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.91■□□□□ 0.14
EXTL3O43909 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
EXTL3O43909 AC011498.7-201ENST00000624986 2027 ntBASIC15.9■□□□□ 0.14
EXTL3O43909 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 OR2I1P-209ENST00000641730 5365 ntBASIC15.9■□□□□ 0.14
EXTL3O43909 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
EXTL3O43909 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.9■□□□□ 0.14
EXTL3O43909 AC104306.2-201ENST00000451877 341 ntBASIC15.9■□□□□ 0.14
EXTL3O43909 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.9■□□□□ 0.14
EXTL3O43909 AL160314.3-201ENST00000556041 767 ntBASIC15.9■□□□□ 0.14
EXTL3O43909 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.9■□□□□ 0.14
EXTL3O43909 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
EXTL3O43909 BNIP3P13-201ENST00000599968 566 ntBASIC15.9■□□□□ 0.14
EXTL3O43909 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.9■□□□□ 0.14
EXTL3O43909 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.9■□□□□ 0.14
EXTL3O43909 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.9■□□□□ 0.14
EXTL3O43909 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
EXTL3O43909 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
EXTL3O43909 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.9■□□□□ 0.14
EXTL3O43909 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
EXTL3O43909 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EXTL3O43909 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
EXTL3O43909 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
EXTL3O43909 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
EXTL3O43909 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.89■□□□□ 0.13
EXTL3O43909 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.89■□□□□ 0.13
EXTL3O43909 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EXTL3O43909 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.89■□□□□ 0.13
EXTL3O43909 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EXTL3O43909 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EXTL3O43909 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
EXTL3O43909 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EXTL3O43909 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
EXTL3O43909 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EXTL3O43909 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.89■□□□□ 0.13
EXTL3O43909 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.89■□□□□ 0.13
EXTL3O43909 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.89■□□□□ 0.13
EXTL3O43909 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.89■□□□□ 0.13
EXTL3O43909 RPL18P13-201ENST00000478088 569 ntBASIC15.89■□□□□ 0.13
EXTL3O43909 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.89■□□□□ 0.13
EXTL3O43909 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
EXTL3O43909 AC005586.2-201ENST00000563946 837 ntBASIC15.89■□□□□ 0.13
EXTL3O43909 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
EXTL3O43909 AL008638.5-201ENST00000623814 1298 ntBASIC15.89■□□□□ 0.13
EXTL3O43909 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.89■□□□□ 0.13
EXTL3O43909 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
EXTL3O43909 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.89■□□□□ 0.13
EXTL3O43909 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.89■□□□□ 0.13
EXTL3O43909 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms