Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
PHF1O43189 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.83□□□□□ -0.35
PHF1O43189 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
PHF1O43189 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PHF1O43189 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.83□□□□□ -0.35
PHF1O43189 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
PHF1O43189 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.83□□□□□ -0.35
PHF1O43189 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
PHF1O43189 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.83□□□□□ -0.36
PHF1O43189 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC12.83□□□□□ -0.36
PHF1O43189 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.83□□□□□ -0.36
PHF1O43189 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.83□□□□□ -0.36
PHF1O43189 HINT2P1-201ENST00000419438 481 ntBASIC12.83□□□□□ -0.36
PHF1O43189 NUS1P3-201ENST00000423502 862 ntBASIC12.83□□□□□ -0.36
PHF1O43189 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.83□□□□□ -0.36
PHF1O43189 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
PHF1O43189 AC009486.1-201ENST00000569860 813 ntBASIC12.83□□□□□ -0.36
PHF1O43189 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.83□□□□□ -0.36
PHF1O43189 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.83□□□□□ -0.36
PHF1O43189 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.83□□□□□ -0.36
PHF1O43189 AC093813.1-201ENST00000605066 256 ntBASIC12.83□□□□□ -0.36
PHF1O43189 U62317.3-201ENST00000608319 855 ntBASIC12.83□□□□□ -0.36
PHF1O43189 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.83□□□□□ -0.36
PHF1O43189 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.83□□□□□ -0.36
PHF1O43189 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.83□□□□□ -0.36
PHF1O43189 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.83□□□□□ -0.36
PHF1O43189 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 DMBT1P1-203ENST00000636837 4628 ntBASIC12.83□□□□□ -0.36
PHF1O43189 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
PHF1O43189 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PHF1O43189 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
PHF1O43189 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PHF1O43189 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 AC027601.5-201ENST00000624065 2482 ntBASIC12.82□□□□□ -0.36
PHF1O43189 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
PHF1O43189 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 MIR326-201ENST00000362220 95 ntBASIC12.82□□□□□ -0.36
PHF1O43189 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
PHF1O43189 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
PHF1O43189 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 AC016694.1-201ENST00000434179 700 ntBASIC12.82□□□□□ -0.36
PHF1O43189 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.82□□□□□ -0.36
PHF1O43189 AC104306.2-201ENST00000451877 341 ntBASIC12.82□□□□□ -0.36
PHF1O43189 AC093433.1-201ENST00000458048 571 ntBASIC12.82□□□□□ -0.36
PHF1O43189 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.82□□□□□ -0.36
PHF1O43189 FTH1P14-201ENST00000482930 551 ntBASIC12.82□□□□□ -0.36
PHF1O43189 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.82□□□□□ -0.36
PHF1O43189 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms