Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NPIPA3F8WFD2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 AC100827.2-201ENST00000563214 1194 ntBASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 AC138696.2-201ENST00000607376 223 ntBASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA3F8WFD2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 PEG13-201ENST00000631594 5667 ntBASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 MIR769-201ENST00000390225 118 ntBASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AL662890.1-201ENST00000396818 632 ntBASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AC016700.1-201ENST00000429424 312 ntBASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AC106794.1-201ENST00000506935 792 ntBASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.42□□□□□ -0.26
NPIPA3F8WFD2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms