Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
C4orf47A7E2U8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AC068418.2-201ENST00000577309 3703 ntBASIC14.31□□□□□ -0.12
C4orf47A7E2U8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AC090616.6-203ENST00000579186 1945 ntBASIC14.31□□□□□ -0.12
C4orf47A7E2U8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AC105250.1-201ENST00000509378 2057 ntBASIC14.31□□□□□ -0.12
C4orf47A7E2U8 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 KRT17P4-201ENST00000429445 819 ntBASIC14.31□□□□□ -0.12
C4orf47A7E2U8 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 DUX4L50-201ENST00000455245 715 ntBASIC14.31□□□□□ -0.12
C4orf47A7E2U8 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AC068587.6-202ENST00000641839 5619 ntBASIC14.31□□□□□ -0.12
C4orf47A7E2U8 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AC003102.2-201ENST00000589195 1469 ntBASIC14.31□□□□□ -0.12
C4orf47A7E2U8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
C4orf47A7E2U8 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 AC138035.3-201ENST00000622706 2791 ntBASIC14.3□□□□□ -0.12
C4orf47A7E2U8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 AC091951.1-201ENST00000512854 2465 ntBASIC14.3□□□□□ -0.12
C4orf47A7E2U8 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 DPY19L2P5-201ENST00000456300 331 ntBASIC14.3□□□□□ -0.12
C4orf47A7E2U8 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 HERC2P11-201ENST00000562845 725 ntBASIC14.3□□□□□ -0.12
C4orf47A7E2U8 AC100756.2-201ENST00000569537 736 ntBASIC14.3□□□□□ -0.12
C4orf47A7E2U8 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.3□□□□□ -0.12
C4orf47A7E2U8 AC018695.6-201ENST00000614011 534 ntBASIC14.3□□□□□ -0.12
C4orf47A7E2U8 REXO1L4P-201ENST00000605109 1937 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms