Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC004835.2-201ENST00000603762 682 ntBASIC12.83□□□□□ -0.36
SHISA3A0PJX4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AC139530.3-201ENST00000620344 690 ntBASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AP001002.3-201ENST00000623482 206 ntBASIC12.83□□□□□ -0.36
SHISA3A0PJX4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CICP1-201ENST00000416803 2410 ntBASIC12.82□□□□□ -0.36
SHISA3A0PJX4 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 TIMM17BP1-201ENST00000545713 516 ntBASIC12.82□□□□□ -0.36
SHISA3A0PJX4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 AL596442.2-201ENST00000610240 980 ntBASIC12.82□□□□□ -0.36
SHISA3A0PJX4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 AL138725.1-201ENST00000407347 1314 ntBASIC12.82□□□□□ -0.36
SHISA3A0PJX4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA3A0PJX4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 NFIC-211ENST00000641145 8399 ntBASIC12.81□□□□□ -0.36
SHISA3A0PJX4 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SHISA3A0PJX4 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms