Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SPCS1Q9Y6A9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS1Q9Y6A9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.71■□□□□ 0.11
SPCS1Q9Y6A9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SPCS1Q9Y6A9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS1Q9Y6A9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SPCS1Q9Y6A9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SPCS1Q9Y6A9 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SPCS1Q9Y6A9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.71■□□□□ 0.11
SPCS1Q9Y6A9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.71■□□□□ 0.1
SPCS1Q9Y6A9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPCS1Q9Y6A9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
SPCS1Q9Y6A9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPCS1Q9Y6A9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SPCS1Q9Y6A9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
SPCS1Q9Y6A9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SPCS1Q9Y6A9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.71■□□□□ 0.1
SPCS1Q9Y6A9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SPCS1Q9Y6A9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS1Q9Y6A9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SPCS1Q9Y6A9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS1Q9Y6A9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS1Q9Y6A9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC15.69■□□□□ 0.1
SPCS1Q9Y6A9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS1Q9Y6A9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS1Q9Y6A9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS1Q9Y6A9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SPCS1Q9Y6A9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SPCS1Q9Y6A9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SPCS1Q9Y6A9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS1Q9Y6A9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS1Q9Y6A9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.67■□□□□ 0.1
SPCS1Q9Y6A9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS1Q9Y6A9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS1Q9Y6A9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.67■□□□□ 0.1
SPCS1Q9Y6A9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms