Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 DUSP8P5-201ENST00000422884 1815 ntBASIC22.05■■□□□ 1.12
PCDHGA11Q9Y5H2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA11Q9Y5H2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA11Q9Y5H2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA11Q9Y5H2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA11Q9Y5H2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA11Q9Y5H2 AC103724.3-201ENST00000564481 992 ntBASIC22.04■■□□□ 1.12
PCDHGA11Q9Y5H2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.04■■□□□ 1.12
PCDHGA11Q9Y5H2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA11Q9Y5H2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.04■■□□□ 1.12
PCDHGA11Q9Y5H2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
PCDHGA11Q9Y5H2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA11Q9Y5H2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA11Q9Y5H2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHGA11Q9Y5H2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.03■■□□□ 1.12
PCDHGA11Q9Y5H2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
PCDHGA11Q9Y5H2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.03■■□□□ 1.12
PCDHGA11Q9Y5H2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA11Q9Y5H2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PCDHGA11Q9Y5H2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA11Q9Y5H2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PCDHGA11Q9Y5H2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA11Q9Y5H2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA11Q9Y5H2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.02■■□□□ 1.12
PCDHGA11Q9Y5H2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.02■■□□□ 1.12
PCDHGA11Q9Y5H2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHGA11Q9Y5H2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHGA11Q9Y5H2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHGA11Q9Y5H2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
PCDHGA11Q9Y5H2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA11Q9Y5H2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA11Q9Y5H2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA11Q9Y5H2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA11Q9Y5H2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA11Q9Y5H2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA11Q9Y5H2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA11Q9Y5H2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA11Q9Y5H2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA11Q9Y5H2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
PCDHGA11Q9Y5H2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA11Q9Y5H2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PCDHGA11Q9Y5H2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA11Q9Y5H2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA11Q9Y5H2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22■■□□□ 1.11
PCDHGA11Q9Y5H2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA11Q9Y5H2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA11Q9Y5H2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA11Q9Y5H2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
PCDHGA11Q9Y5H2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA11Q9Y5H2 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA11Q9Y5H2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA11Q9Y5H2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA11Q9Y5H2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGA11Q9Y5H2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
PCDHGA11Q9Y5H2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA11Q9Y5H2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDHGA11Q9Y5H2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA11Q9Y5H2 ALDH1A3-203ENST00000557963 1670 ntBASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 AL031848.2-201ENST00000607670 837 ntBASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA11Q9Y5H2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA11Q9Y5H2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA11Q9Y5H2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA11Q9Y5H2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGA11Q9Y5H2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA11Q9Y5H2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA11Q9Y5H2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA11Q9Y5H2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDHGA11Q9Y5H2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA11Q9Y5H2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDHGA11Q9Y5H2 AC004448.1-201ENST00000458332 883 ntBASIC21.95■■□□□ 1.1
PCDHGA11Q9Y5H2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms