Protein–RNA interactions for Protein: Q9Y4P9

SPEF1, Sperm flagellar protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPEF1Q9Y4P9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPEF1Q9Y4P9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPEF1Q9Y4P9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPEF1Q9Y4P9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPEF1Q9Y4P9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPEF1Q9Y4P9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPEF1Q9Y4P9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPEF1Q9Y4P9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPEF1Q9Y4P9 MIR4281-201ENST00000580852 62 ntBASIC20.2■□□□□ 0.82
SPEF1Q9Y4P9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPEF1Q9Y4P9 SLC6A10P-202ENST00000431994 2058 ntBASIC20.18■□□□□ 0.82
SPEF1Q9Y4P9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPEF1Q9Y4P9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPEF1Q9Y4P9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SPEF1Q9Y4P9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPEF1Q9Y4P9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.18■□□□□ 0.82
SPEF1Q9Y4P9 AC137630.3-201ENST00000607245 391 ntBASIC20.18■□□□□ 0.82
SPEF1Q9Y4P9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.18■□□□□ 0.82
SPEF1Q9Y4P9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 PKD1P6-201ENST00000343738 4769 ntBASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPEF1Q9Y4P9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPEF1Q9Y4P9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SPEF1Q9Y4P9 AC239859.2-201ENST00000444165 318 ntBASIC20.16■□□□□ 0.82
SPEF1Q9Y4P9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SPEF1Q9Y4P9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPEF1Q9Y4P9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPEF1Q9Y4P9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPEF1Q9Y4P9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPEF1Q9Y4P9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.16■□□□□ 0.82
SPEF1Q9Y4P9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPEF1Q9Y4P9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SPEF1Q9Y4P9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
SPEF1Q9Y4P9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPEF1Q9Y4P9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPEF1Q9Y4P9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPEF1Q9Y4P9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPEF1Q9Y4P9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPEF1Q9Y4P9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPEF1Q9Y4P9 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPEF1Q9Y4P9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPEF1Q9Y4P9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms