Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDHGB4Q9UN71 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB4Q9UN71 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB4Q9UN71 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
PCDHGB4Q9UN71 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB4Q9UN71 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDHGB4Q9UN71 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDHGB4Q9UN71 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 AL592295.1-201ENST00000400984 884 ntBASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 SPCS2P3-201ENST00000500401 656 ntBASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 AC087393.1-201ENST00000582896 145 ntBASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDHGB4Q9UN71 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGB4Q9UN71 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGB4Q9UN71 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCDHGB4Q9UN71 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHGB4Q9UN71 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.91■■□□□ 1.1
PCDHGB4Q9UN71 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCDHGB4Q9UN71 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 HSD17B1P1-201ENST00000590052 955 ntBASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGB4Q9UN71 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
PCDHGB4Q9UN71 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGB4Q9UN71 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGB4Q9UN71 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGB4Q9UN71 DUX4L9-201ENST00000449051 1259 ntBASIC21.89■■□□□ 1.09
PCDHGB4Q9UN71 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.89■■□□□ 1.09
PCDHGB4Q9UN71 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGB4Q9UN71 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGB4Q9UN71 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHGB4Q9UN71 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
PCDHGB4Q9UN71 AC090877.2-201ENST00000558441 1738 ntBASIC21.89■■□□□ 1.09
PCDHGB4Q9UN71 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGB4Q9UN71 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PCDHGB4Q9UN71 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHGB4Q9UN71 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB4Q9UN71 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB4Q9UN71 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB4Q9UN71 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB4Q9UN71 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB4Q9UN71 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGB4Q9UN71 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDHGB4Q9UN71 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PCDHGB4Q9UN71 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGB4Q9UN71 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGB4Q9UN71 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGB4Q9UN71 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGB4Q9UN71 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 U85056.1-201ENST00000616429 682 ntBASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 AC233723.2-201ENST00000623798 2106 ntBASIC21.85■■□□□ 1.09
PCDHGB4Q9UN71 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGB4Q9UN71 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms