Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 AC103724.3-201ENST00000564481 992 ntBASIC19.69■□□□□ 0.74
NUP50Q9UKX7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NUP50Q9UKX7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NUP50Q9UKX7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.67■□□□□ 0.74
NUP50Q9UKX7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NUP50Q9UKX7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 LONRF2P2-201ENST00000439212 571 ntBASIC19.65■□□□□ 0.74
NUP50Q9UKX7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NUP50Q9UKX7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.64■□□□□ 0.73
NUP50Q9UKX7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.63■□□□□ 0.73
NUP50Q9UKX7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms