Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
STAG3Q9UJ98 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
STAG3Q9UJ98 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
STAG3Q9UJ98 SNX3-202ENST00000349379 890 ntTSL 2 BASIC33.07■■■□□ 2.88
STAG3Q9UJ98 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
STAG3Q9UJ98 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC33.07■■■□□ 2.88
STAG3Q9UJ98 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC33.07■■■□□ 2.88
STAG3Q9UJ98 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC33.06■■■□□ 2.88
STAG3Q9UJ98 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
STAG3Q9UJ98 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
STAG3Q9UJ98 SLC47A1P1-202ENST00000449666 945 ntBASIC33.06■■■□□ 2.88
STAG3Q9UJ98 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC33.06■■■□□ 2.88
STAG3Q9UJ98 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
STAG3Q9UJ98 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 NKILA-201ENST00000613231 537 ntTSL 4 BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
STAG3Q9UJ98 TSPY26P-201ENST00000476365 1326 ntBASIC33.04■■■□□ 2.88
STAG3Q9UJ98 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC33.04■■■□□ 2.88
STAG3Q9UJ98 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
STAG3Q9UJ98 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
STAG3Q9UJ98 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
STAG3Q9UJ98 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC33.04■■■□□ 2.88
STAG3Q9UJ98 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC33.04■■■□□ 2.88
STAG3Q9UJ98 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC33.04■■■□□ 2.88
STAG3Q9UJ98 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
STAG3Q9UJ98 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC33.04■■■□□ 2.88
STAG3Q9UJ98 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC33.04■■■□□ 2.88
STAG3Q9UJ98 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
STAG3Q9UJ98 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC33.03■■■□□ 2.88
STAG3Q9UJ98 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC33.03■■■□□ 2.88
STAG3Q9UJ98 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
STAG3Q9UJ98 DUX4L2-201ENST00000561772 1275 ntBASIC33.03■■■□□ 2.88
STAG3Q9UJ98 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC33.03■■■□□ 2.88
STAG3Q9UJ98 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC33.03■■■□□ 2.88
STAG3Q9UJ98 AC092437.1-201ENST00000624794 1048 ntBASIC33.03■■■□□ 2.88
STAG3Q9UJ98 DUX4L6-201ENST00000626483 1275 ntBASIC33.03■■■□□ 2.88
STAG3Q9UJ98 DUX4L1-201ENST00000627662 1275 ntBASIC33.03■■■□□ 2.88
STAG3Q9UJ98 DUX4L8-201ENST00000629013 1275 ntBASIC33.03■■■□□ 2.88
STAG3Q9UJ98 DUX4L3-201ENST00000630187 1275 ntBASIC33.03■■■□□ 2.88
STAG3Q9UJ98 DUX4L7-201ENST00000630678 1275 ntBASIC33.03■■■□□ 2.88
STAG3Q9UJ98 DUX4L5-201ENST00000630834 1275 ntBASIC33.03■■■□□ 2.88
STAG3Q9UJ98 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
STAG3Q9UJ98 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC33.03■■■□□ 2.88
STAG3Q9UJ98 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC33.03■■■□□ 2.88
STAG3Q9UJ98 VGF-203ENST00000611537 1622 ntTSL 5 BASIC33.02■■■□□ 2.88
STAG3Q9UJ98 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC33.02■■■□□ 2.88
STAG3Q9UJ98 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC33.02■■■□□ 2.88
STAG3Q9UJ98 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC33.02■■■□□ 2.88
STAG3Q9UJ98 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
STAG3Q9UJ98 pRNA.6-201ENST00000610482 90 ntBASIC33.02■■■□□ 2.88
STAG3Q9UJ98 pRNA.5-201ENST00000612139 90 ntBASIC33.02■■■□□ 2.88
STAG3Q9UJ98 pRNA.11-201ENST00000618423 90 ntBASIC33.02■■■□□ 2.88
STAG3Q9UJ98 pRNA.13-201ENST00000619112 90 ntBASIC33.02■■■□□ 2.88
STAG3Q9UJ98 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
STAG3Q9UJ98 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC33.02■■■□□ 2.88
STAG3Q9UJ98 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.88
STAG3Q9UJ98 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
STAG3Q9UJ98 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC33.01■■■□□ 2.87
STAG3Q9UJ98 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC33.01■■■□□ 2.87
STAG3Q9UJ98 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC33.01■■■□□ 2.87
STAG3Q9UJ98 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
STAG3Q9UJ98 RAB43-208ENST00000615093 783 ntTSL 5 BASIC33■■■□□ 2.87
STAG3Q9UJ98 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
STAG3Q9UJ98 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
STAG3Q9UJ98 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC33■■■□□ 2.87
STAG3Q9UJ98 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC33■■■□□ 2.87
STAG3Q9UJ98 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
STAG3Q9UJ98 SLC6A10P-202ENST00000431994 2058 ntBASIC33■■■□□ 2.87
STAG3Q9UJ98 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
STAG3Q9UJ98 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
STAG3Q9UJ98 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
STAG3Q9UJ98 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
STAG3Q9UJ98 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC32.99■■■□□ 2.87
STAG3Q9UJ98 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC32.99■■■□□ 2.87
STAG3Q9UJ98 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC32.99■■■□□ 2.87
STAG3Q9UJ98 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
STAG3Q9UJ98 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
STAG3Q9UJ98 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC32.98■■■□□ 2.87
STAG3Q9UJ98 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
STAG3Q9UJ98 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
STAG3Q9UJ98 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC32.98■■■□□ 2.87
STAG3Q9UJ98 AC004911.1-201ENST00000416316 871 ntBASIC32.98■■■□□ 2.87
STAG3Q9UJ98 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC32.98■■■□□ 2.87
STAG3Q9UJ98 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
STAG3Q9UJ98 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
STAG3Q9UJ98 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
STAG3Q9UJ98 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
STAG3Q9UJ98 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
STAG3Q9UJ98 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
STAG3Q9UJ98 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms