Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 SLC47A1P1-202ENST00000449666 945 ntBASIC30.99■■■□□ 2.55
PHRF1Q9P1Y6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.99■■■□□ 2.55
PHRF1Q9P1Y6 DUSP8P4-201ENST00000399538 1761 ntBASIC30.99■■■□□ 2.55
PHRF1Q9P1Y6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.99■■■□□ 2.55
PHRF1Q9P1Y6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
PHRF1Q9P1Y6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC30.98■■■□□ 2.55
PHRF1Q9P1Y6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.98■■■□□ 2.55
PHRF1Q9P1Y6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
PHRF1Q9P1Y6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
PHRF1Q9P1Y6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PHRF1Q9P1Y6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
PHRF1Q9P1Y6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.97■■■□□ 2.55
PHRF1Q9P1Y6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC30.97■■■□□ 2.55
PHRF1Q9P1Y6 YBX1P1-201ENST00000445822 960 ntBASIC30.97■■■□□ 2.55
PHRF1Q9P1Y6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
PHRF1Q9P1Y6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC30.96■■■□□ 2.55
PHRF1Q9P1Y6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC30.96■■■□□ 2.55
PHRF1Q9P1Y6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC30.96■■■□□ 2.55
PHRF1Q9P1Y6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PHRF1Q9P1Y6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.96■■■□□ 2.55
PHRF1Q9P1Y6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
PHRF1Q9P1Y6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
PHRF1Q9P1Y6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PHRF1Q9P1Y6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PHRF1Q9P1Y6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC30.95■■■□□ 2.55
PHRF1Q9P1Y6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PHRF1Q9P1Y6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.95■■■□□ 2.54
PHRF1Q9P1Y6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.95■■■□□ 2.54
PHRF1Q9P1Y6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
PHRF1Q9P1Y6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
PHRF1Q9P1Y6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PHRF1Q9P1Y6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
PHRF1Q9P1Y6 GRAMD4P2-201ENST00000423297 1097 ntBASIC30.94■■■□□ 2.54
PHRF1Q9P1Y6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC30.94■■■□□ 2.54
PHRF1Q9P1Y6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC30.94■■■□□ 2.54
PHRF1Q9P1Y6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
PHRF1Q9P1Y6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC30.93■■■□□ 2.54
PHRF1Q9P1Y6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
PHRF1Q9P1Y6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.93■■■□□ 2.54
PHRF1Q9P1Y6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC30.93■■■□□ 2.54
PHRF1Q9P1Y6 MIR3181-201ENST00000578512 73 ntBASIC30.93■■■□□ 2.54
PHRF1Q9P1Y6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
PHRF1Q9P1Y6 SLC6A10P-202ENST00000431994 2058 ntBASIC30.93■■■□□ 2.54
PHRF1Q9P1Y6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC30.93■■■□□ 2.54
PHRF1Q9P1Y6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC30.92■■■□□ 2.54
PHRF1Q9P1Y6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
PHRF1Q9P1Y6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.92■■■□□ 2.54
PHRF1Q9P1Y6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC30.92■■■□□ 2.54
PHRF1Q9P1Y6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
PHRF1Q9P1Y6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
PHRF1Q9P1Y6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
PHRF1Q9P1Y6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
PHRF1Q9P1Y6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC30.91■■■□□ 2.54
PHRF1Q9P1Y6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
PHRF1Q9P1Y6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC30.91■■■□□ 2.54
PHRF1Q9P1Y6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.91■■■□□ 2.54
PHRF1Q9P1Y6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PHRF1Q9P1Y6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC30.91■■■□□ 2.54
PHRF1Q9P1Y6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.91■■■□□ 2.54
PHRF1Q9P1Y6 AC012414.1-201ENST00000556676 535 ntBASIC30.9■■■□□ 2.54
PHRF1Q9P1Y6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC30.89■■■□□ 2.54
PHRF1Q9P1Y6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC30.89■■■□□ 2.54
PHRF1Q9P1Y6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC30.89■■■□□ 2.54
PHRF1Q9P1Y6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
PHRF1Q9P1Y6 AC022517.1-201ENST00000592429 346 ntBASIC30.89■■■□□ 2.54
PHRF1Q9P1Y6 AL137784.2-201ENST00000607332 1000 ntBASIC30.89■■■□□ 2.54
PHRF1Q9P1Y6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PHRF1Q9P1Y6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
PHRF1Q9P1Y6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
PHRF1Q9P1Y6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
PHRF1Q9P1Y6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PHRF1Q9P1Y6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PHRF1Q9P1Y6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
PHRF1Q9P1Y6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.88■■■□□ 2.53
PHRF1Q9P1Y6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC30.88■■■□□ 2.53
PHRF1Q9P1Y6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
PHRF1Q9P1Y6 TSPY26P-201ENST00000476365 1326 ntBASIC30.88■■■□□ 2.53
PHRF1Q9P1Y6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
PHRF1Q9P1Y6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.87■■■□□ 2.53
PHRF1Q9P1Y6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC30.86■■■□□ 2.53
PHRF1Q9P1Y6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC30.86■■■□□ 2.53
PHRF1Q9P1Y6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC30.86■■■□□ 2.53
PHRF1Q9P1Y6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC30.86■■■□□ 2.53
PHRF1Q9P1Y6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PHRF1Q9P1Y6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.86■■■□□ 2.53
PHRF1Q9P1Y6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PHRF1Q9P1Y6 AL022069.1-201ENST00000568025 1636 ntBASIC30.85■■■□□ 2.53
PHRF1Q9P1Y6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms