Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LRRC40Q9H9A6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRC40Q9H9A6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRC40Q9H9A6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.13■■□□□ 1.29
LRRC40Q9H9A6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.13■■□□□ 1.29
LRRC40Q9H9A6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.13■■□□□ 1.29
LRRC40Q9H9A6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
LRRC40Q9H9A6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
LRRC40Q9H9A6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.12■■□□□ 1.29
LRRC40Q9H9A6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
LRRC40Q9H9A6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.12■■□□□ 1.29
LRRC40Q9H9A6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
LRRC40Q9H9A6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.12■■□□□ 1.29
LRRC40Q9H9A6 AL031848.2-201ENST00000607670 837 ntBASIC23.12■■□□□ 1.29
LRRC40Q9H9A6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
LRRC40Q9H9A6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.11■■□□□ 1.29
LRRC40Q9H9A6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC40Q9H9A6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC40Q9H9A6 AC004448.1-201ENST00000458332 883 ntBASIC23.11■■□□□ 1.29
LRRC40Q9H9A6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC40Q9H9A6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
LRRC40Q9H9A6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.11■■□□□ 1.29
LRRC40Q9H9A6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
LRRC40Q9H9A6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRRC40Q9H9A6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRRC40Q9H9A6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
LRRC40Q9H9A6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LRRC40Q9H9A6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LRRC40Q9H9A6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LRRC40Q9H9A6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LRRC40Q9H9A6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.1■■□□□ 1.29
LRRC40Q9H9A6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
LRRC40Q9H9A6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
LRRC40Q9H9A6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.09■■□□□ 1.29
LRRC40Q9H9A6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
LRRC40Q9H9A6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.08■■□□□ 1.29
LRRC40Q9H9A6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LRRC40Q9H9A6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.08■■□□□ 1.29
LRRC40Q9H9A6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.08■■□□□ 1.29
LRRC40Q9H9A6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.08■■□□□ 1.29
LRRC40Q9H9A6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LRRC40Q9H9A6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
LRRC40Q9H9A6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.08■■□□□ 1.29
LRRC40Q9H9A6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 AC137630.3-201ENST00000607245 391 ntBASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
LRRC40Q9H9A6 AC012676.1-201ENST00000574705 1949 ntBASIC23.06■■□□□ 1.28
LRRC40Q9H9A6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRRC40Q9H9A6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRRC40Q9H9A6 AC068473.5-201ENST00000616428 2072 ntBASIC23.06■■□□□ 1.28
LRRC40Q9H9A6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.06■■□□□ 1.28
LRRC40Q9H9A6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LRRC40Q9H9A6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
LRRC40Q9H9A6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
LRRC40Q9H9A6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRRC40Q9H9A6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LRRC40Q9H9A6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LRRC40Q9H9A6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
LRRC40Q9H9A6 ANOS2P-203ENST00000472227 1816 ntBASIC23.05■■□□□ 1.28
LRRC40Q9H9A6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.05■■□□□ 1.28
LRRC40Q9H9A6 AC133561.1-201ENST00000568600 2415 ntBASIC23.04■■□□□ 1.28
LRRC40Q9H9A6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRC40Q9H9A6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LRRC40Q9H9A6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRC40Q9H9A6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.04■■□□□ 1.28
LRRC40Q9H9A6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.04■■□□□ 1.28
LRRC40Q9H9A6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
LRRC40Q9H9A6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRC40Q9H9A6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRC40Q9H9A6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LRRC40Q9H9A6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.03■■□□□ 1.28
LRRC40Q9H9A6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRC40Q9H9A6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.03■■□□□ 1.28
LRRC40Q9H9A6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRC40Q9H9A6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.03■■□□□ 1.28
LRRC40Q9H9A6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRC40Q9H9A6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LRRC40Q9H9A6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LRRC40Q9H9A6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
LRRC40Q9H9A6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
LRRC40Q9H9A6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms