Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf49Q9H741 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf49Q9H741 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf49Q9H741 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf49Q9H741 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf49Q9H741 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf49Q9H741 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.23■□□□□ 0.83
C12orf49Q9H741 MIR4466-201ENST00000606121 54 ntBASIC20.23■□□□□ 0.83
C12orf49Q9H741 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.23■□□□□ 0.83
C12orf49Q9H741 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf49Q9H741 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C12orf49Q9H741 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.23■□□□□ 0.83
C12orf49Q9H741 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf49Q9H741 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.22■□□□□ 0.83
C12orf49Q9H741 AL161729.1-201ENST00000604104 1402 ntBASIC20.22■□□□□ 0.83
C12orf49Q9H741 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf49Q9H741 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
C12orf49Q9H741 AL512631.2-201ENST00000604634 923 ntBASIC20.22■□□□□ 0.83
C12orf49Q9H741 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
C12orf49Q9H741 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
C12orf49Q9H741 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
C12orf49Q9H741 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.22■□□□□ 0.83
C12orf49Q9H741 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf49Q9H741 LINC01124-201ENST00000409786 2117 ntBASIC20.21■□□□□ 0.83
C12orf49Q9H741 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf49Q9H741 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
C12orf49Q9H741 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
C12orf49Q9H741 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.21■□□□□ 0.83
C12orf49Q9H741 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
C12orf49Q9H741 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf49Q9H741 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
C12orf49Q9H741 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
C12orf49Q9H741 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf49Q9H741 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf49Q9H741 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf49Q9H741 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf49Q9H741 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf49Q9H741 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.19■□□□□ 0.82
C12orf49Q9H741 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf49Q9H741 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
C12orf49Q9H741 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
C12orf49Q9H741 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf49Q9H741 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf49Q9H741 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf49Q9H741 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf49Q9H741 ALDH1A3-203ENST00000557963 1670 ntBASIC20.18■□□□□ 0.82
C12orf49Q9H741 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf49Q9H741 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf49Q9H741 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
C12orf49Q9H741 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.18■□□□□ 0.82
C12orf49Q9H741 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf49Q9H741 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.18■□□□□ 0.82
C12orf49Q9H741 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
C12orf49Q9H741 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.18■□□□□ 0.82
C12orf49Q9H741 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf49Q9H741 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf49Q9H741 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
C12orf49Q9H741 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.17■□□□□ 0.82
C12orf49Q9H741 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf49Q9H741 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf49Q9H741 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
C12orf49Q9H741 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
C12orf49Q9H741 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.16■□□□□ 0.82
C12orf49Q9H741 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.16■□□□□ 0.82
C12orf49Q9H741 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
C12orf49Q9H741 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf49Q9H741 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf49Q9H741 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
C12orf49Q9H741 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.16■□□□□ 0.82
C12orf49Q9H741 AL139125.2-201ENST00000623134 1869 ntBASIC20.16■□□□□ 0.82
C12orf49Q9H741 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
C12orf49Q9H741 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.15■□□□□ 0.82
C12orf49Q9H741 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.15■□□□□ 0.82
C12orf49Q9H741 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
C12orf49Q9H741 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C12orf49Q9H741 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.15■□□□□ 0.82
C12orf49Q9H741 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
C12orf49Q9H741 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.15■□□□□ 0.82
C12orf49Q9H741 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.15■□□□□ 0.82
C12orf49Q9H741 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C12orf49Q9H741 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.14■□□□□ 0.81
C12orf49Q9H741 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
C12orf49Q9H741 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.14■□□□□ 0.81
C12orf49Q9H741 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.14■□□□□ 0.81
C12orf49Q9H741 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.14■□□□□ 0.81
C12orf49Q9H741 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
C12orf49Q9H741 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
C12orf49Q9H741 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
C12orf49Q9H741 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
C12orf49Q9H741 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.13■□□□□ 0.81
C12orf49Q9H741 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.13■□□□□ 0.81
C12orf49Q9H741 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
C12orf49Q9H741 SRD5A1P1-201ENST00000442297 786 ntBASIC20.13■□□□□ 0.81
C12orf49Q9H741 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.13■□□□□ 0.81
C12orf49Q9H741 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
C12orf49Q9H741 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
C12orf49Q9H741 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
C12orf49Q9H741 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
C12orf49Q9H741 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
C12orf49Q9H741 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms