Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.7■■□□□ 1.39
EBF3Q9H4W6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
EBF3Q9H4W6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
EBF3Q9H4W6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
EBF3Q9H4W6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.7■■□□□ 1.38
EBF3Q9H4W6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.7■■□□□ 1.38
EBF3Q9H4W6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
EBF3Q9H4W6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.7■■□□□ 1.38
EBF3Q9H4W6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 EDA-201ENST00000338901 1233 ntBASIC23.69■■□□□ 1.38
EBF3Q9H4W6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 AL355001.2-201ENST00000620617 1191 ntBASIC23.69■■□□□ 1.38
EBF3Q9H4W6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.69■■□□□ 1.38
EBF3Q9H4W6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
EBF3Q9H4W6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.68■■□□□ 1.38
EBF3Q9H4W6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.68■■□□□ 1.38
EBF3Q9H4W6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.68■■□□□ 1.38
EBF3Q9H4W6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
EBF3Q9H4W6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
EBF3Q9H4W6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
EBF3Q9H4W6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
EBF3Q9H4W6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
EBF3Q9H4W6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
EBF3Q9H4W6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.67■■□□□ 1.38
EBF3Q9H4W6 MIR6089-201ENST00000616698 64 ntBASIC23.67■■□□□ 1.38
EBF3Q9H4W6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
EBF3Q9H4W6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
EBF3Q9H4W6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.66■■□□□ 1.38
EBF3Q9H4W6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.66■■□□□ 1.38
EBF3Q9H4W6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
EBF3Q9H4W6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.66■■□□□ 1.38
EBF3Q9H4W6 DUX4L19-201ENST00000557448 1267 ntBASIC23.66■■□□□ 1.38
EBF3Q9H4W6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
EBF3Q9H4W6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
EBF3Q9H4W6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.65■■□□□ 1.38
EBF3Q9H4W6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.65■■□□□ 1.38
EBF3Q9H4W6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
EBF3Q9H4W6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
EBF3Q9H4W6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.65■■□□□ 1.38
EBF3Q9H4W6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.65■■□□□ 1.38
EBF3Q9H4W6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
EBF3Q9H4W6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.65■■□□□ 1.38
EBF3Q9H4W6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
EBF3Q9H4W6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
EBF3Q9H4W6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
EBF3Q9H4W6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
EBF3Q9H4W6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
EBF3Q9H4W6 AL022069.1-201ENST00000568025 1636 ntBASIC23.64■■□□□ 1.38
EBF3Q9H4W6 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.64■■□□□ 1.37
EBF3Q9H4W6 SYT6-210ENST00000641643 1587 ntBASIC23.64■■□□□ 1.37
EBF3Q9H4W6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
EBF3Q9H4W6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
EBF3Q9H4W6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
EBF3Q9H4W6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
EBF3Q9H4W6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
EBF3Q9H4W6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
EBF3Q9H4W6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.63■■□□□ 1.37
EBF3Q9H4W6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.63■■□□□ 1.37
EBF3Q9H4W6 RARRES2P6-201ENST00000567333 442 ntBASIC23.63■■□□□ 1.37
EBF3Q9H4W6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.63■■□□□ 1.37
EBF3Q9H4W6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.63■■□□□ 1.37
EBF3Q9H4W6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 AF213884.3-201ENST00000563833 479 ntBASIC23.62■■□□□ 1.37
EBF3Q9H4W6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 AL136967.2-201ENST00000623968 743 ntBASIC23.62■■□□□ 1.37
EBF3Q9H4W6 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
EBF3Q9H4W6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.61■■□□□ 1.37
EBF3Q9H4W6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
EBF3Q9H4W6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
EBF3Q9H4W6 AC099791.2-201ENST00000605725 427 ntBASIC23.61■■□□□ 1.37
EBF3Q9H4W6 AC092171.4-201ENST00000609130 632 ntBASIC23.61■■□□□ 1.37
EBF3Q9H4W6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.61■■□□□ 1.37
EBF3Q9H4W6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms