Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHMP4BQ9H444 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHMP4BQ9H444 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHMP4BQ9H444 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.71■■■□□ 2.19
CHMP4BQ9H444 SNX5-217ENST00000606557 1087 ntBASIC28.71■■■□□ 2.19
CHMP4BQ9H444 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHMP4BQ9H444 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
CHMP4BQ9H444 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.7■■■□□ 2.18
CHMP4BQ9H444 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
CHMP4BQ9H444 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.7■■■□□ 2.18
CHMP4BQ9H444 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC28.7■■■□□ 2.18
CHMP4BQ9H444 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
CHMP4BQ9H444 AC021242.3-201ENST00000607598 1377 ntBASIC28.7■■■□□ 2.18
CHMP4BQ9H444 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CHMP4BQ9H444 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHMP4BQ9H444 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.69■■■□□ 2.18
CHMP4BQ9H444 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHMP4BQ9H444 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
CHMP4BQ9H444 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
CHMP4BQ9H444 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.68■■■□□ 2.18
CHMP4BQ9H444 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHMP4BQ9H444 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHMP4BQ9H444 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHMP4BQ9H444 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
CHMP4BQ9H444 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHMP4BQ9H444 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
CHMP4BQ9H444 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
CHMP4BQ9H444 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHMP4BQ9H444 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHMP4BQ9H444 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
CHMP4BQ9H444 Z92544.1-202ENST00000571933 1220 ntBASIC28.67■■■□□ 2.18
CHMP4BQ9H444 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
CHMP4BQ9H444 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHMP4BQ9H444 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
CHMP4BQ9H444 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.66■■■□□ 2.18
CHMP4BQ9H444 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
CHMP4BQ9H444 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHMP4BQ9H444 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.66■■■□□ 2.18
CHMP4BQ9H444 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHMP4BQ9H444 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHMP4BQ9H444 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC28.66■■■□□ 2.18
CHMP4BQ9H444 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.66■■■□□ 2.18
CHMP4BQ9H444 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
CHMP4BQ9H444 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHMP4BQ9H444 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC28.65■■■□□ 2.18
CHMP4BQ9H444 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CHMP4BQ9H444 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
CHMP4BQ9H444 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CHMP4BQ9H444 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC28.65■■■□□ 2.18
CHMP4BQ9H444 AC092068.2-201ENST00000590491 1708 ntBASIC28.65■■■□□ 2.18
CHMP4BQ9H444 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CHMP4BQ9H444 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
CHMP4BQ9H444 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.65■■■□□ 2.18
CHMP4BQ9H444 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
CHMP4BQ9H444 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 SENP5-202ENST00000419026 973 ntTSL 3 BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 MIR6722-201ENST00000617286 78 ntBASIC28.64■■■□□ 2.18
CHMP4BQ9H444 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
CHMP4BQ9H444 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
CHMP4BQ9H444 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.63■■■□□ 2.17
CHMP4BQ9H444 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CHMP4BQ9H444 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.63■■■□□ 2.17
CHMP4BQ9H444 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHMP4BQ9H444 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.63■■■□□ 2.17
CHMP4BQ9H444 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC28.63■■■□□ 2.17
CHMP4BQ9H444 ANOS2P-203ENST00000472227 1816 ntBASIC28.63■■■□□ 2.17
CHMP4BQ9H444 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHMP4BQ9H444 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC28.63■■■□□ 2.17
CHMP4BQ9H444 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CHMP4BQ9H444 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CHMP4BQ9H444 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.62■■■□□ 2.17
CHMP4BQ9H444 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.62■■■□□ 2.17
CHMP4BQ9H444 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CHMP4BQ9H444 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.62■■■□□ 2.17
CHMP4BQ9H444 RARRES2P1-201ENST00000474487 481 ntBASIC28.62■■■□□ 2.17
CHMP4BQ9H444 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.62■■■□□ 2.17
CHMP4BQ9H444 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CHMP4BQ9H444 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC28.62■■■□□ 2.17
CHMP4BQ9H444 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CHMP4BQ9H444 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CHMP4BQ9H444 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC28.61■■■□□ 2.17
CHMP4BQ9H444 KRT125P-201ENST00000546827 989 ntBASIC28.61■■■□□ 2.17
CHMP4BQ9H444 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.61■■■□□ 2.17
CHMP4BQ9H444 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
CHMP4BQ9H444 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.61■■■□□ 2.17
CHMP4BQ9H444 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHMP4BQ9H444 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHMP4BQ9H444 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC28.6■■■□□ 2.17
CHMP4BQ9H444 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CHMP4BQ9H444 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
CHMP4BQ9H444 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.6■■■□□ 2.17
CHMP4BQ9H444 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms