Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.27■■□□□ 1.16
SPTBN4Q9H254 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SPTBN4Q9H254 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPTBN4Q9H254 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPTBN4Q9H254 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.26■■□□□ 1.15
SPTBN4Q9H254 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.26■■□□□ 1.15
SPTBN4Q9H254 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
SPTBN4Q9H254 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPTBN4Q9H254 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SPTBN4Q9H254 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPTBN4Q9H254 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SPTBN4Q9H254 AC073210.2-201ENST00000430369 194 ntBASIC22.26■■□□□ 1.15
SPTBN4Q9H254 SMUG1P1-201ENST00000590640 811 ntBASIC22.26■■□□□ 1.15
SPTBN4Q9H254 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC22.26■■□□□ 1.15
SPTBN4Q9H254 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SPTBN4Q9H254 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SPTBN4Q9H254 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.25■■□□□ 1.15
SPTBN4Q9H254 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SPTBN4Q9H254 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPTBN4Q9H254 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPTBN4Q9H254 IGHV3-19-201ENST00000521488 291 ntBASIC22.24■■□□□ 1.15
SPTBN4Q9H254 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPTBN4Q9H254 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.24■■□□□ 1.15
SPTBN4Q9H254 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPTBN4Q9H254 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
SPTBN4Q9H254 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.23■■□□□ 1.15
SPTBN4Q9H254 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.23■■□□□ 1.15
SPTBN4Q9H254 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.23■■□□□ 1.15
SPTBN4Q9H254 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SPTBN4Q9H254 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.23■■□□□ 1.15
SPTBN4Q9H254 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.23■■□□□ 1.15
SPTBN4Q9H254 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
SPTBN4Q9H254 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SPTBN4Q9H254 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SPTBN4Q9H254 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.22■■□□□ 1.15
SPTBN4Q9H254 AC090877.2-201ENST00000558441 1738 ntBASIC22.22■■□□□ 1.15
SPTBN4Q9H254 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
SPTBN4Q9H254 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SPTBN4Q9H254 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.22■■□□□ 1.15
SPTBN4Q9H254 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.22■■□□□ 1.15
SPTBN4Q9H254 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.22■■□□□ 1.15
SPTBN4Q9H254 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.21■■□□□ 1.15
SPTBN4Q9H254 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.21■■□□□ 1.15
SPTBN4Q9H254 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.21■■□□□ 1.15
SPTBN4Q9H254 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SPTBN4Q9H254 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPTBN4Q9H254 AL138781.1-201ENST00000566567 1274 ntBASIC22.21■■□□□ 1.15
SPTBN4Q9H254 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SPTBN4Q9H254 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SPTBN4Q9H254 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.21■■□□□ 1.15
SPTBN4Q9H254 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
SPTBN4Q9H254 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
SPTBN4Q9H254 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.2■■□□□ 1.14
SPTBN4Q9H254 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.2■■□□□ 1.14
SPTBN4Q9H254 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.2■■□□□ 1.14
SPTBN4Q9H254 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SPTBN4Q9H254 POU5F1P3-201ENST00000428824 1078 ntBASIC22.2■■□□□ 1.14
SPTBN4Q9H254 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.2■■□□□ 1.14
SPTBN4Q9H254 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SPTBN4Q9H254 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SPTBN4Q9H254 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SPTBN4Q9H254 ITM2C-210ENST00000620962 501 ntBASIC22.19■■□□□ 1.14
SPTBN4Q9H254 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SPTBN4Q9H254 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SPTBN4Q9H254 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.19■■□□□ 1.14
SPTBN4Q9H254 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SPTBN4Q9H254 MIR1224-201ENST00000408193 85 ntBASIC22.18■■□□□ 1.14
SPTBN4Q9H254 RPS2P52-201ENST00000469610 820 ntBASIC22.18■■□□□ 1.14
SPTBN4Q9H254 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.18■■□□□ 1.14
SPTBN4Q9H254 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.18■■□□□ 1.14
SPTBN4Q9H254 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SPTBN4Q9H254 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SPTBN4Q9H254 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SPTBN4Q9H254 FOXO3B-201ENST00000395675 1928 ntBASIC22.18■■□□□ 1.14
SPTBN4Q9H254 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SPTBN4Q9H254 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SPTBN4Q9H254 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SPTBN4Q9H254 AC083906.2-201ENST00000511578 360 ntBASIC22.17■■□□□ 1.14
SPTBN4Q9H254 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.17■■□□□ 1.14
SPTBN4Q9H254 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.17■■□□□ 1.14
SPTBN4Q9H254 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SPTBN4Q9H254 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.17■■□□□ 1.14
SPTBN4Q9H254 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SPTBN4Q9H254 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SPTBN4Q9H254 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.17■■□□□ 1.14
SPTBN4Q9H254 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.17■■□□□ 1.14
SPTBN4Q9H254 AP004607.4-201ENST00000530158 1459 ntBASIC22.17■■□□□ 1.14
SPTBN4Q9H254 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
SPTBN4Q9H254 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SPTBN4Q9H254 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPTBN4Q9H254 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.16■■□□□ 1.14
SPTBN4Q9H254 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SPTBN4Q9H254 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.16■■□□□ 1.14
SPTBN4Q9H254 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.16■■□□□ 1.14
SPTBN4Q9H254 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.16■■□□□ 1.14
SPTBN4Q9H254 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SPTBN4Q9H254 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
SPTBN4Q9H254 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SPTBN4Q9H254 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.15■■□□□ 1.14
SPTBN4Q9H254 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms