Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 SYT6-210ENST00000641643 1587 ntBASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB1BQ9H0U4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB1BQ9H0U4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 AC009102.2-201ENST00000606772 1639 ntBASIC19.29■□□□□ 0.68
RAB1BQ9H0U4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 AC142381.2-201ENST00000566120 298 ntBASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB1BQ9H0U4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB1BQ9H0U4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
RAB1BQ9H0U4 AC241377.3-202ENST00000626088 1088 ntBASIC19.27■□□□□ 0.68
RAB1BQ9H0U4 AC241585.3-202ENST00000628937 1088 ntBASIC19.27■□□□□ 0.68
RAB1BQ9H0U4 AC245100.8-202ENST00000629247 1058 ntBASIC19.27■□□□□ 0.68
RAB1BQ9H0U4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB1BQ9H0U4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB1BQ9H0U4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RAB1BQ9H0U4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB1BQ9H0U4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB1BQ9H0U4 ALDH1A3-203ENST00000557963 1670 ntBASIC19.27■□□□□ 0.67
RAB1BQ9H0U4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RAB1BQ9H0U4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB1BQ9H0U4 EDA-201ENST00000338901 1233 ntBASIC19.26■□□□□ 0.67
RAB1BQ9H0U4 MIR935-201ENST00000401179 91 ntBASIC19.26■□□□□ 0.67
RAB1BQ9H0U4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
RAB1BQ9H0U4 AC024257.2-201ENST00000549699 147 ntBASIC19.26■□□□□ 0.67
RAB1BQ9H0U4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB1BQ9H0U4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB1BQ9H0U4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB1BQ9H0U4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 AC142381.3-201ENST00000568208 1670 ntBASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 AC099791.2-201ENST00000605725 427 ntBASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 AL355001.2-201ENST00000620617 1191 ntBASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB1BQ9H0U4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB1BQ9H0U4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB1BQ9H0U4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB1BQ9H0U4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RAB1BQ9H0U4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.24■□□□□ 0.67
RAB1BQ9H0U4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB1BQ9H0U4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAB1BQ9H0U4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB1BQ9H0U4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.23■□□□□ 0.67
RAB1BQ9H0U4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB1BQ9H0U4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.23■□□□□ 0.67
RAB1BQ9H0U4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB1BQ9H0U4 C17orf82-201ENST00000623772 1530 ntBASIC19.23■□□□□ 0.67
RAB1BQ9H0U4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAB1BQ9H0U4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAB1BQ9H0U4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB1BQ9H0U4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB1BQ9H0U4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.22■□□□□ 0.67
RAB1BQ9H0U4 AL138724.1-201ENST00000606771 1088 ntBASIC19.22■□□□□ 0.67
RAB1BQ9H0U4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RAB1BQ9H0U4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms