Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VRK1Q99986 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.93■□□□□ 0.78
VRK1Q99986 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
VRK1Q99986 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.92■□□□□ 0.78
VRK1Q99986 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VRK1Q99986 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VRK1Q99986 MTDHP2-201ENST00000601468 714 ntBASIC19.92■□□□□ 0.78
VRK1Q99986 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VRK1Q99986 AC090877.2-201ENST00000558441 1738 ntBASIC19.92■□□□□ 0.78
VRK1Q99986 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VRK1Q99986 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
VRK1Q99986 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VRK1Q99986 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VRK1Q99986 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VRK1Q99986 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VRK1Q99986 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.91■□□□□ 0.78
VRK1Q99986 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
VRK1Q99986 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.91■□□□□ 0.78
VRK1Q99986 AC010997.5-201ENST00000609182 354 ntBASIC19.91■□□□□ 0.78
VRK1Q99986 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
VRK1Q99986 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VRK1Q99986 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK1Q99986 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK1Q99986 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK1Q99986 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
VRK1Q99986 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.9■□□□□ 0.78
VRK1Q99986 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.9■□□□□ 0.78
VRK1Q99986 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.9■□□□□ 0.78
VRK1Q99986 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK1Q99986 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VRK1Q99986 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.9■□□□□ 0.78
VRK1Q99986 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VRK1Q99986 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VRK1Q99986 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK1Q99986 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VRK1Q99986 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
VRK1Q99986 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.89■□□□□ 0.77
VRK1Q99986 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.89■□□□□ 0.77
VRK1Q99986 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.89■□□□□ 0.77
VRK1Q99986 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.89■□□□□ 0.77
VRK1Q99986 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VRK1Q99986 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VRK1Q99986 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VRK1Q99986 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.88■□□□□ 0.77
VRK1Q99986 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.88■□□□□ 0.77
VRK1Q99986 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
VRK1Q99986 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VRK1Q99986 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VRK1Q99986 AP003733.4-201ENST00000623785 1697 ntBASIC19.87■□□□□ 0.77
VRK1Q99986 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.87■□□□□ 0.77
VRK1Q99986 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
VRK1Q99986 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.87■□□□□ 0.77
VRK1Q99986 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 LINC01124-201ENST00000409786 2117 ntBASIC19.87■□□□□ 0.77
VRK1Q99986 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VRK1Q99986 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK1Q99986 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VRK1Q99986 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK1Q99986 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK1Q99986 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VRK1Q99986 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.86■□□□□ 0.77
VRK1Q99986 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK1Q99986 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
VRK1Q99986 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.86■□□□□ 0.77
VRK1Q99986 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.86■□□□□ 0.77
VRK1Q99986 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VRK1Q99986 AF131216.4-201ENST00000638924 1588 ntBASIC19.86■□□□□ 0.77
VRK1Q99986 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
VRK1Q99986 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK1Q99986 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.85■□□□□ 0.77
VRK1Q99986 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK1Q99986 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK1Q99986 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.85■□□□□ 0.77
VRK1Q99986 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
VRK1Q99986 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK1Q99986 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.85■□□□□ 0.77
VRK1Q99986 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.85■□□□□ 0.77
VRK1Q99986 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK1Q99986 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VRK1Q99986 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
VRK1Q99986 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VRK1Q99986 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VRK1Q99986 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
VRK1Q99986 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VRK1Q99986 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VRK1Q99986 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
VRK1Q99986 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VRK1Q99986 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VRK1Q99986 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VRK1Q99986 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VRK1Q99986 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms