Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
S1PR3Q99500 KRT18P24-201ENST00000344739 1156 ntBASIC18.72■□□□□ 0.59
S1PR3Q99500 AC120024.1-201ENST00000562672 995 ntBASIC18.72■□□□□ 0.59
S1PR3Q99500 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
S1PR3Q99500 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
S1PR3Q99500 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
S1PR3Q99500 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
S1PR3Q99500 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.71■□□□□ 0.59
S1PR3Q99500 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
S1PR3Q99500 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
S1PR3Q99500 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.71■□□□□ 0.59
S1PR3Q99500 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.71■□□□□ 0.59
S1PR3Q99500 AC103834.1-201ENST00000520383 144 ntBASIC18.71■□□□□ 0.59
S1PR3Q99500 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
S1PR3Q99500 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.71■□□□□ 0.59
S1PR3Q99500 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
S1PR3Q99500 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
S1PR3Q99500 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
S1PR3Q99500 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
S1PR3Q99500 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.7■□□□□ 0.58
S1PR3Q99500 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
S1PR3Q99500 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
S1PR3Q99500 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
S1PR3Q99500 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.7■□□□□ 0.58
S1PR3Q99500 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.7■□□□□ 0.58
S1PR3Q99500 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.7■□□□□ 0.58
S1PR3Q99500 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
S1PR3Q99500 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
S1PR3Q99500 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.7■□□□□ 0.58
S1PR3Q99500 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
S1PR3Q99500 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.69■□□□□ 0.58
S1PR3Q99500 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
S1PR3Q99500 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.69■□□□□ 0.58
S1PR3Q99500 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
S1PR3Q99500 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
S1PR3Q99500 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
S1PR3Q99500 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
S1PR3Q99500 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
S1PR3Q99500 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
S1PR3Q99500 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.69■□□□□ 0.58
S1PR3Q99500 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.69■□□□□ 0.58
S1PR3Q99500 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
S1PR3Q99500 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
S1PR3Q99500 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
S1PR3Q99500 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
S1PR3Q99500 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
S1PR3Q99500 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
S1PR3Q99500 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.69■□□□□ 0.58
S1PR3Q99500 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
S1PR3Q99500 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
S1PR3Q99500 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
S1PR3Q99500 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
S1PR3Q99500 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
S1PR3Q99500 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
S1PR3Q99500 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.68■□□□□ 0.58
S1PR3Q99500 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
S1PR3Q99500 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
S1PR3Q99500 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
S1PR3Q99500 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
S1PR3Q99500 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
S1PR3Q99500 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
S1PR3Q99500 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
S1PR3Q99500 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
S1PR3Q99500 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.67■□□□□ 0.58
S1PR3Q99500 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.67■□□□□ 0.58
S1PR3Q99500 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.67■□□□□ 0.58
S1PR3Q99500 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
S1PR3Q99500 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
S1PR3Q99500 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.67■□□□□ 0.58
S1PR3Q99500 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
S1PR3Q99500 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
S1PR3Q99500 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
S1PR3Q99500 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
S1PR3Q99500 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
S1PR3Q99500 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.66■□□□□ 0.58
S1PR3Q99500 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.66■□□□□ 0.58
S1PR3Q99500 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.66■□□□□ 0.58
S1PR3Q99500 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
S1PR3Q99500 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
S1PR3Q99500 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
S1PR3Q99500 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
S1PR3Q99500 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
S1PR3Q99500 AC012676.1-201ENST00000574705 1949 ntBASIC18.65■□□□□ 0.58
S1PR3Q99500 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
S1PR3Q99500 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
S1PR3Q99500 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
S1PR3Q99500 MIR4281-201ENST00000580852 62 ntBASIC18.65■□□□□ 0.58
S1PR3Q99500 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
S1PR3Q99500 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
S1PR3Q99500 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
S1PR3Q99500 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
S1PR3Q99500 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
S1PR3Q99500 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
S1PR3Q99500 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.65■□□□□ 0.58
S1PR3Q99500 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.64■□□□□ 0.58
S1PR3Q99500 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
S1PR3Q99500 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
S1PR3Q99500 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
S1PR3Q99500 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.64■□□□□ 0.57
S1PR3Q99500 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms