Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC27.02■■□□□ 1.92
NEK1Q96PY6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
NEK1Q96PY6 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
NEK1Q96PY6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.01■■□□□ 1.91
NEK1Q96PY6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
NEK1Q96PY6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
NEK1Q96PY6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
NEK1Q96PY6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
NEK1Q96PY6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC27.01■■□□□ 1.91
NEK1Q96PY6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC27■■□□□ 1.91
NEK1Q96PY6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC27■■□□□ 1.91
NEK1Q96PY6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NEK1Q96PY6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NEK1Q96PY6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
NEK1Q96PY6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27■■□□□ 1.91
NEK1Q96PY6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27■■□□□ 1.91
NEK1Q96PY6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC27■■□□□ 1.91
NEK1Q96PY6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC27■■□□□ 1.91
NEK1Q96PY6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27■■□□□ 1.91
NEK1Q96PY6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
NEK1Q96PY6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27■■□□□ 1.91
NEK1Q96PY6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27■■□□□ 1.91
NEK1Q96PY6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.99■■□□□ 1.91
NEK1Q96PY6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
NEK1Q96PY6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
NEK1Q96PY6 AL451085.2-201ENST00000605085 799 ntBASIC26.99■■□□□ 1.91
NEK1Q96PY6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.99■■□□□ 1.91
NEK1Q96PY6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
NEK1Q96PY6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
NEK1Q96PY6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NEK1Q96PY6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NEK1Q96PY6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.98■■□□□ 1.91
NEK1Q96PY6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NEK1Q96PY6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NEK1Q96PY6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NEK1Q96PY6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.97■■□□□ 1.91
NEK1Q96PY6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
NEK1Q96PY6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
NEK1Q96PY6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.97■■□□□ 1.91
NEK1Q96PY6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.97■■□□□ 1.91
NEK1Q96PY6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.97■■□□□ 1.91
NEK1Q96PY6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
NEK1Q96PY6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
NEK1Q96PY6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
NEK1Q96PY6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
NEK1Q96PY6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
NEK1Q96PY6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NEK1Q96PY6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NEK1Q96PY6 AC009299.2-201ENST00000482477 511 ntBASIC26.96■■□□□ 1.91
NEK1Q96PY6 Z92544.1-202ENST00000571933 1220 ntBASIC26.96■■□□□ 1.91
NEK1Q96PY6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.95■■□□□ 1.91
NEK1Q96PY6 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
NEK1Q96PY6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.95■■□□□ 1.9
NEK1Q96PY6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
NEK1Q96PY6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
NEK1Q96PY6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NEK1Q96PY6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.94■■□□□ 1.9
NEK1Q96PY6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
NEK1Q96PY6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NEK1Q96PY6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.94■■□□□ 1.9
NEK1Q96PY6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC26.94■■□□□ 1.9
NEK1Q96PY6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC26.94■■□□□ 1.9
NEK1Q96PY6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NEK1Q96PY6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NEK1Q96PY6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.93■■□□□ 1.9
NEK1Q96PY6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
NEK1Q96PY6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
NEK1Q96PY6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.93■■□□□ 1.9
NEK1Q96PY6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.93■■□□□ 1.9
NEK1Q96PY6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
NEK1Q96PY6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NEK1Q96PY6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NEK1Q96PY6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NEK1Q96PY6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
NEK1Q96PY6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NEK1Q96PY6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
NEK1Q96PY6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.92■■□□□ 1.9
NEK1Q96PY6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.92■■□□□ 1.9
NEK1Q96PY6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
NEK1Q96PY6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.92■■□□□ 1.9
NEK1Q96PY6 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
NEK1Q96PY6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.92■■□□□ 1.9
NEK1Q96PY6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.92■■□□□ 1.9
NEK1Q96PY6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC26.92■■□□□ 1.9
NEK1Q96PY6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
NEK1Q96PY6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NEK1Q96PY6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
NEK1Q96PY6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
NEK1Q96PY6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.91■■□□□ 1.9
NEK1Q96PY6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NEK1Q96PY6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
NEK1Q96PY6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
NEK1Q96PY6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.91■■□□□ 1.9
NEK1Q96PY6 AC239859.2-201ENST00000444165 318 ntBASIC26.91■■□□□ 1.9
NEK1Q96PY6 KRT125P-201ENST00000546827 989 ntBASIC26.91■■□□□ 1.9
NEK1Q96PY6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
NEK1Q96PY6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
NEK1Q96PY6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
NEK1Q96PY6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.91■■□□□ 1.9
NEK1Q96PY6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms