Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.66■■□□□ 1.22
CFAP54Q96N23 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP54Q96N23 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP54Q96N23 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.65■■□□□ 1.22
CFAP54Q96N23 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP54Q96N23 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.65■■□□□ 1.22
CFAP54Q96N23 AC092171.4-201ENST00000609130 632 ntBASIC22.65■■□□□ 1.22
CFAP54Q96N23 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.65■■□□□ 1.22
CFAP54Q96N23 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP54Q96N23 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP54Q96N23 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CFAP54Q96N23 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP54Q96N23 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CFAP54Q96N23 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
CFAP54Q96N23 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CFAP54Q96N23 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP54Q96N23 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.63■■□□□ 1.21
CFAP54Q96N23 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP54Q96N23 AC016769.1-201ENST00000409132 1010 ntBASIC22.63■■□□□ 1.21
CFAP54Q96N23 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.63■■□□□ 1.21
CFAP54Q96N23 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP54Q96N23 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP54Q96N23 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
CFAP54Q96N23 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.62■■□□□ 1.21
CFAP54Q96N23 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP54Q96N23 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CFAP54Q96N23 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP54Q96N23 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.62■■□□□ 1.21
CFAP54Q96N23 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP54Q96N23 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP54Q96N23 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP54Q96N23 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.61■■□□□ 1.21
CFAP54Q96N23 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.61■■□□□ 1.21
CFAP54Q96N23 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.61■■□□□ 1.21
CFAP54Q96N23 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP54Q96N23 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP54Q96N23 AC006970.2-201ENST00000450065 779 ntBASIC22.61■■□□□ 1.21
CFAP54Q96N23 C17orf82-201ENST00000623772 1530 ntBASIC22.61■■□□□ 1.21
CFAP54Q96N23 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CFAP54Q96N23 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.61■■□□□ 1.21
CFAP54Q96N23 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.61■■□□□ 1.21
CFAP54Q96N23 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CFAP54Q96N23 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CFAP54Q96N23 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP54Q96N23 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
CFAP54Q96N23 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.6■■□□□ 1.21
CFAP54Q96N23 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.6■■□□□ 1.21
CFAP54Q96N23 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP54Q96N23 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CFAP54Q96N23 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.6■■□□□ 1.21
CFAP54Q96N23 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.6■■□□□ 1.21
CFAP54Q96N23 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CFAP54Q96N23 FOXO3B-201ENST00000395675 1928 ntBASIC22.6■■□□□ 1.21
CFAP54Q96N23 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CFAP54Q96N23 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.59■■□□□ 1.21
CFAP54Q96N23 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CFAP54Q96N23 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.59■■□□□ 1.21
CFAP54Q96N23 BX842568.3-201ENST00000418104 571 ntBASIC22.59■■□□□ 1.21
CFAP54Q96N23 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CFAP54Q96N23 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.59■■□□□ 1.21
CFAP54Q96N23 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
CFAP54Q96N23 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.59■■□□□ 1.21
CFAP54Q96N23 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CFAP54Q96N23 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CFAP54Q96N23 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.58■■□□□ 1.21
CFAP54Q96N23 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CFAP54Q96N23 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.58■■□□□ 1.21
CFAP54Q96N23 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CFAP54Q96N23 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CFAP54Q96N23 AC087239.1-201ENST00000622671 572 ntBASIC22.58■■□□□ 1.21
CFAP54Q96N23 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CFAP54Q96N23 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CFAP54Q96N23 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CFAP54Q96N23 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CFAP54Q96N23 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.58■■□□□ 1.2
CFAP54Q96N23 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CFAP54Q96N23 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CFAP54Q96N23 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CFAP54Q96N23 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP54Q96N23 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP54Q96N23 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.57■■□□□ 1.2
CFAP54Q96N23 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
CFAP54Q96N23 MIR663A-201ENST00000385250 93 ntBASIC22.57■■□□□ 1.2
CFAP54Q96N23 GPX1P1-201ENST00000388829 606 ntBASIC22.57■■□□□ 1.2
CFAP54Q96N23 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
CFAP54Q96N23 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CFAP54Q96N23 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP54Q96N23 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CFAP54Q96N23 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.56■■□□□ 1.2
CFAP54Q96N23 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.56■■□□□ 1.2
CFAP54Q96N23 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP54Q96N23 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP54Q96N23 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.56■■□□□ 1.2
CFAP54Q96N23 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP54Q96N23 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP54Q96N23 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CFAP54Q96N23 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CFAP54Q96N23 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.56■■□□□ 1.2
CFAP54Q96N23 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.56■■□□□ 1.2
CFAP54Q96N23 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms