Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ZNF48Q96MX3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF48Q96MX3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF48Q96MX3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ZNF48Q96MX3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ZNF48Q96MX3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 EDA-201ENST00000338901 1233 ntBASIC18.5■□□□□ 0.55
ZNF48Q96MX3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 MIR6089-201ENST00000616698 64 ntBASIC18.5■□□□□ 0.55
ZNF48Q96MX3 AL355001.2-201ENST00000620617 1191 ntBASIC18.5■□□□□ 0.55
ZNF48Q96MX3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF48Q96MX3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF48Q96MX3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF48Q96MX3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF48Q96MX3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF48Q96MX3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ZNF48Q96MX3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.49■□□□□ 0.55
ZNF48Q96MX3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ZNF48Q96MX3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF48Q96MX3 AC093323.1-202ENST00000635031 2045 ntBASIC18.49■□□□□ 0.55
ZNF48Q96MX3 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.49■□□□□ 0.55
ZNF48Q96MX3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ZNF48Q96MX3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 AL139125.2-201ENST00000623134 1869 ntBASIC18.48■□□□□ 0.55
ZNF48Q96MX3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 RARRES2P6-201ENST00000567333 442 ntBASIC18.48■□□□□ 0.55
ZNF48Q96MX3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ZNF48Q96MX3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.47■□□□□ 0.55
ZNF48Q96MX3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.47■□□□□ 0.55
ZNF48Q96MX3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF48Q96MX3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF48Q96MX3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF48Q96MX3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF48Q96MX3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF48Q96MX3 DUX4L19-201ENST00000557448 1267 ntBASIC18.46■□□□□ 0.55
ZNF48Q96MX3 AF213884.3-201ENST00000563833 479 ntBASIC18.46■□□□□ 0.55
ZNF48Q96MX3 AL136967.2-201ENST00000623968 743 ntBASIC18.46■□□□□ 0.55
ZNF48Q96MX3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF48Q96MX3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ZNF48Q96MX3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 SYT6-210ENST00000641643 1587 ntBASIC18.45■□□□□ 0.54
ZNF48Q96MX3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF48Q96MX3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms